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<h1 class="epydoc">Source Code for <a href="pln_inco.bioscope.util-module.html">Module pln_inco.bioscope.util</a></h1>
<pre class="py-src">
<a name="L1"></a><tt class="py-lineno">  1</tt>  <tt class="py-line"><tt class="py-comment"># -*- coding: utf-8 -*- </tt> </tt>
<a name="L2"></a><tt class="py-lineno">  2</tt>  <tt class="py-line"> </tt>
<a name="L3"></a><tt class="py-lineno">  3</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">nltk</tt><tt class="py-op">,</tt><tt class="py-name">nltk</tt><tt class="py-op">.</tt><tt class="py-name">tokenize</tt><tt class="py-op">,</tt><tt class="py-name">xml</tt><tt class="py-op">.</tt><tt class="py-name">etree</tt> </tt>
<a name="L4"></a><tt class="py-lineno">  4</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">os</tt><tt class="py-op">,</tt><tt class="py-name">codecs</tt><tt class="py-op">,</tt><tt class="py-name">fnmatch</tt><tt class="py-op">,</tt><tt class="py-name">re</tt><tt class="py-op">,</tt><tt class="py-name">types</tt><tt class="py-op">,</tt> <tt class="py-name">copy</tt><tt class="py-op">,</tt><tt class="py-name">shutil</tt> </tt>
<a name="L5"></a><tt class="py-lineno">  5</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt> </tt>
<a name="L6"></a><tt class="py-lineno">  6</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">pickle</tt> </tt>
<a name="L7"></a><tt class="py-lineno">  7</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-name">sys</tt> <tt class="py-keyword">import</tt> <tt class="py-op">*</tt> </tt>
<a name="L8"></a><tt class="py-lineno">  8</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt id="link-0" class="py-name" targets="Package pln_inco=pln_inco-module.html"><a title="pln_inco" class="py-name" href="#" onclick="return doclink('link-0', 'pln_inco', 'link-0');">pln_inco</a></tt> <tt class="py-keyword">import</tt> <tt id="link-1" class="py-name" targets="Module pln_inco.graphviz=pln_inco.graphviz-module.html"><a title="pln_inco.graphviz" class="py-name" href="#" onclick="return doclink('link-1', 'graphviz', 'link-1');">graphviz</a></tt><tt class="py-op">,</tt><tt id="link-2" class="py-name" targets="Module pln_inco.penn_treebank=pln_inco.penn_treebank-module.html"><a title="pln_inco.penn_treebank" class="py-name" href="#" onclick="return doclink('link-2', 'penn_treebank', 'link-2');">penn_treebank</a></tt><tt class="py-op">,</tt><tt id="link-3" class="py-name" targets="Module pln_inco.stanford_parser=pln_inco.stanford_parser-module.html"><a title="pln_inco.stanford_parser" class="py-name" href="#" onclick="return doclink('link-3', 'stanford_parser', 'link-3');">stanford_parser</a></tt> </tt>
<a name="L9"></a><tt class="py-lineno">  9</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-name">string</tt> <tt class="py-keyword">import</tt> <tt class="py-op">*</tt> </tt>
<a name="L10"></a><tt class="py-lineno"> 10</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">sqlite3</tt> </tt>
<a name="L11"></a><tt class="py-lineno"> 11</tt>  <tt class="py-line"> </tt>
<a name="BioscopeCorpusProcessor"></a><div id="BioscopeCorpusProcessor-def"><a name="L12"></a><tt class="py-lineno"> 12</tt> <a class="py-toggle" href="#" id="BioscopeCorpusProcessor-toggle" onclick="return toggle('BioscopeCorpusProcessor');">-</a><tt class="py-line"><tt class="py-keyword">class</tt> <a class="py-def-name" href="pln_inco.bioscope.util.BioscopeCorpusProcessor-class.html">BioscopeCorpusProcessor</a><tt class="py-op">:</tt> </tt>
</div><div id="BioscopeCorpusProcessor-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="BioscopeCorpusProcessor-expanded"><a name="L13"></a><tt class="py-lineno"> 13</tt>  <tt class="py-line">        <tt class="py-docstring">""" M&#233;todos para procesar el corpus original, generando eventualmente archivos intermedios</tt> </tt>
<a name="L14"></a><tt class="py-lineno"> 14</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L15"></a><tt class="py-lineno"> 15</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar working_dir: directorio de trabajo</tt> </tt>
<a name="L16"></a><tt class="py-lineno"> 16</tt>  <tt class="py-line"><tt class="py-docstring">        @type working_dir: C{string}</tt> </tt>
<a name="L17"></a><tt class="py-lineno"> 17</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L18"></a><tt class="py-lineno"> 18</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar txt_dir: directorio con los textos originales, un archivo por documento</tt> </tt>
<a name="L19"></a><tt class="py-lineno"> 19</tt>  <tt class="py-line"><tt class="py-docstring">        @type txt_dir: C{string}</tt> </tt>
<a name="L20"></a><tt class="py-lineno"> 20</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L21"></a><tt class="py-lineno"> 21</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar parsed_files_dir: directorio para el resultado del an&#225;lisis sintactico de las oraciones</tt> </tt>
<a name="L22"></a><tt class="py-lineno"> 22</tt>  <tt class="py-line"><tt class="py-docstring">        @type parsed_files_dir: C{string}</tt> </tt>
<a name="L23"></a><tt class="py-lineno"> 23</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L24"></a><tt class="py-lineno"> 24</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar bioscope_files_dir: directorio con los archivos con marcas bioscope, uno por documento</tt> </tt>
<a name="L25"></a><tt class="py-lineno"> 25</tt>  <tt class="py-line"><tt class="py-docstring">        @type bioscope_files_dir: C{string}</tt> </tt>
<a name="L26"></a><tt class="py-lineno"> 26</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L27"></a><tt class="py-lineno"> 27</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar event_dir: directorio con los documentos en el Genia Event para el corpus</tt> </tt>
<a name="L28"></a><tt class="py-lineno"> 28</tt>  <tt class="py-line"><tt class="py-docstring">        @type event_dir: C{string}</tt> </tt>
<a name="L29"></a><tt class="py-lineno"> 29</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L30"></a><tt class="py-lineno"> 30</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar genia_files_dir: directorio con los archivos resultante del an&#225;lisis con Genia de los textos originales. Uno por cada oraci&#243;n</tt> </tt>
<a name="L31"></a><tt class="py-lineno"> 31</tt>  <tt class="py-line"><tt class="py-docstring">        @type genia_files_dir: C{string}</tt> </tt>
<a name="L32"></a><tt class="py-lineno"> 32</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L33"></a><tt class="py-lineno"> 33</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar att_dir: directorio con los archivos de atributos de las oraciones, para mostrar</tt> </tt>
<a name="L34"></a><tt class="py-lineno"> 34</tt>  <tt class="py-line"><tt class="py-docstring">        @type att_dir: C{string}</tt> </tt>
<a name="L35"></a><tt class="py-lineno"> 35</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L36"></a><tt class="py-lineno"> 36</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar crf_corpus_dir: directorio con el corpus para procesar con crf y sus resultados</tt> </tt>
<a name="L37"></a><tt class="py-lineno"> 37</tt>  <tt class="py-line"><tt class="py-docstring">        @type crf_corpus_dir: C{string}</tt> </tt>
<a name="L38"></a><tt class="py-lineno"> 38</tt>  <tt class="py-line"><tt class="py-docstring">                </tt> </tt>
<a name="L39"></a><tt class="py-lineno"> 39</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar genia_articles_dir: archivos con el resultado del an&#225;lisis de GENIA, separado por documentos</tt> </tt>
<a name="L40"></a><tt class="py-lineno"> 40</tt>  <tt class="py-line"><tt class="py-docstring">        @type genia_articles_dir: C{string}</tt> </tt>
<a name="L41"></a><tt class="py-lineno"> 41</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L42"></a><tt class="py-lineno"> 42</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar genia_temp_file: archivo temporal para el an&#225;lisis de genia. Siempre se llama 'genia_temp.txt' y est&#225; en el directorio de trabajo</tt> </tt>
<a name="L43"></a><tt class="py-lineno"> 43</tt>  <tt class="py-line"><tt class="py-docstring">        @type genia_temp_file: C{string}</tt> </tt>
<a name="L44"></a><tt class="py-lineno"> 44</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar genia_temp_results_files: resultado del an&#225;lisis con Genia. Siempre se llama 'genia_temp.genia' y est&#225; en el directorio de trabajo</tt> </tt>
<a name="L45"></a><tt class="py-lineno"> 45</tt>  <tt class="py-line"><tt class="py-docstring">        @type genia_temp_results_files: C{string}</tt> </tt>
<a name="L46"></a><tt class="py-lineno"> 46</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L47"></a><tt class="py-lineno"> 47</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar genia_event_corpus_dir: corpus Genia Event original</tt> </tt>
<a name="L48"></a><tt class="py-lineno"> 48</tt>  <tt class="py-line"><tt class="py-docstring">        @type genia_event_corpus_dir: C{string}</tt> </tt>
<a name="L49"></a><tt class="py-lineno"> 49</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L50"></a><tt class="py-lineno"> 50</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar parser_grammar_file: archivo con la gram&#225;tica para el parser de Stanford</tt> </tt>
<a name="L51"></a><tt class="py-lineno"> 51</tt>  <tt class="py-line"><tt class="py-docstring">        @type parser_grammar_file: C{string}</tt> </tt>
<a name="L52"></a><tt class="py-lineno"> 52</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L53"></a><tt class="py-lineno"> 53</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar original_bioscope_corpus: corpus Bioscope original, consistente en un solo archivo</tt> </tt>
<a name="L54"></a><tt class="py-lineno"> 54</tt>  <tt class="py-line"><tt class="py-docstring">        @type original_bioscope_corpus: C{xml.etree.ElementTree}</tt> </tt>
<a name="L55"></a><tt class="py-lineno"> 55</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L56"></a><tt class="py-lineno"> 56</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar bioscope_files_corpus: corpus Bioscope original, separado por documentos</tt> </tt>
<a name="L57"></a><tt class="py-lineno"> 57</tt>  <tt class="py-line"><tt class="py-docstring">        @type bioscope_files_corpus: C{nltk.corpus.XMLCorpusReader}</tt> </tt>
<a name="L58"></a><tt class="py-lineno"> 58</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L59"></a><tt class="py-lineno"> 59</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar parsed_files_corpus: archivos con el an&#225;lisis sint&#225;ctico, separado por documentos</tt> </tt>
<a name="L60"></a><tt class="py-lineno"> 60</tt>  <tt class="py-line"><tt class="py-docstring">        @type parsed_files_corpus: C{nltk.corpus.BracketParseCorpusReader}</tt> </tt>
<a name="L61"></a><tt class="py-lineno"> 61</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L62"></a><tt class="py-lineno"> 62</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar genia_files_corpus: archivos con el resultado del an&#225;lisis de GENIA, separado por oraciones</tt> </tt>
<a name="L63"></a><tt class="py-lineno"> 63</tt>  <tt class="py-line"><tt class="py-docstring">        @type genia_files_corpus: C{nltk.corpus.WordListCorpusReader}</tt> </tt>
<a name="L64"></a><tt class="py-lineno"> 64</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L65"></a><tt class="py-lineno"> 65</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar training_filename: corpus de entrenamiento para CRF/Yamcha </tt> </tt>
<a name="L66"></a><tt class="py-lineno"> 66</tt>  <tt class="py-line"><tt class="py-docstring">        @type training_filename:C{string}</tt> </tt>
<a name="L67"></a><tt class="py-lineno"> 67</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L68"></a><tt class="py-lineno"> 68</tt>  <tt class="py-line"><tt class="py-docstring">        @ivar att_database: archivo SQLite donde se guarda el corpus. Se llama attributes.db, y est&#225; en el C{working_dir}</tt> </tt>
<a name="L69"></a><tt class="py-lineno"> 69</tt>  <tt class="py-line"><tt class="py-docstring">        @type att_database:C{string}</tt> </tt>
<a name="L70"></a><tt class="py-lineno"> 70</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L71"></a><tt class="py-lineno"> 71</tt>  <tt class="py-line"><tt class="py-docstring">        """</tt> </tt>
<a name="L72"></a><tt class="py-lineno"> 72</tt>  <tt class="py-line">         </tt>
<a name="L73"></a><tt class="py-lineno"> 73</tt>  <tt class="py-line">         </tt>
<a name="BioscopeCorpusProcessor.__init__"></a><div id="BioscopeCorpusProcessor.__init__-def"><a name="L74"></a><tt class="py-lineno"> 74</tt> <a class="py-toggle" href="#" id="BioscopeCorpusProcessor.__init__-toggle" onclick="return toggle('BioscopeCorpusProcessor.__init__');">-</a><tt class="py-line">        <tt class="py-keyword">def</tt> <a class="py-def-name" href="pln_inco.bioscope.util.BioscopeCorpusProcessor-class.html#__init__">__init__</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt> <tt class="py-param">working_dir</tt><tt class="py-op">,</tt> <tt class="py-param">bioscope_xml_file</tt><tt class="py-op">,</tt> <tt class="py-param">genia_event_corpus_dir</tt><tt class="py-op">,</tt><tt class="py-param">parser_grammar_file</tt><tt class="py-op">,</tt><tt class="py-param">genia_home</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="BioscopeCorpusProcessor.__init__-collapsed" style="display:none;" pad="+++" indent="++++++++++++"></div><div id="BioscopeCorpusProcessor.__init__-expanded"><a name="L75"></a><tt class="py-lineno"> 75</tt>  <tt class="py-line">         </tt>
<a name="L76"></a><tt class="py-lineno"> 76</tt>  <tt class="py-line">                <tt class="py-docstring">"""</tt> </tt>
<a name="L77"></a><tt class="py-lineno"> 77</tt>  <tt class="py-line"><tt class="py-docstring">                Carga las variables necesarias de configuraci&#243;n para procesar los archivos del corpus genia original y resultados intermedios</tt> </tt>
<a name="L78"></a><tt class="py-lineno"> 78</tt>  <tt class="py-line"><tt class="py-docstring">                </tt> </tt>
<a name="L79"></a><tt class="py-lineno"> 79</tt>  <tt class="py-line"><tt class="py-docstring">                @arg working_dir: directorio de trabajo</tt> </tt>
<a name="L80"></a><tt class="py-lineno"> 80</tt>  <tt class="py-line"><tt class="py-docstring">                @type working_dir: C{string}</tt> </tt>
<a name="L81"></a><tt class="py-lineno"> 81</tt>  <tt class="py-line"><tt class="py-docstring">                @arg bioscope_xml_file: archivo del corpus bioscope</tt> </tt>
<a name="L82"></a><tt class="py-lineno"> 82</tt>  <tt class="py-line"><tt class="py-docstring">                @type bioscope_xml_file: C{string}</tt> </tt>
<a name="L83"></a><tt class="py-lineno"> 83</tt>  <tt class="py-line"><tt class="py-docstring">                @arg genia_event_corpus_dir: directorio donde est&#225; el corpus Genia Event</tt> </tt>
<a name="L84"></a><tt class="py-lineno"> 84</tt>  <tt class="py-line"><tt class="py-docstring">                @type genia_event_corpus_dir: C{string}</tt> </tt>
<a name="L85"></a><tt class="py-lineno"> 85</tt>  <tt class="py-line"><tt class="py-docstring">                @arg parser_grammar_file: archivo de configuraci&#243;n para el parser de Stanford</tt> </tt>
<a name="L86"></a><tt class="py-lineno"> 86</tt>  <tt class="py-line"><tt class="py-docstring">                @type parser_grammar_file: C{string}</tt> </tt>
<a name="L87"></a><tt class="py-lineno"> 87</tt>  <tt class="py-line"><tt class="py-docstring">                @arg genia_home: directorio donde est&#225; instalado el tagger de genia</tt> </tt>
<a name="L88"></a><tt class="py-lineno"> 88</tt>  <tt class="py-line"><tt class="py-docstring">                @type genia_home: C{string}</tt> </tt>
<a name="L89"></a><tt class="py-lineno"> 89</tt>  <tt class="py-line"><tt class="py-docstring">                @rtype: C{None}</tt> </tt>
<a name="L90"></a><tt class="py-lineno"> 90</tt>  <tt class="py-line"><tt class="py-docstring">                """</tt> </tt>
<a name="L91"></a><tt class="py-lineno"> 91</tt>  <tt class="py-line">                 </tt>
<a name="L92"></a><tt class="py-lineno"> 92</tt>  <tt class="py-line">                <tt class="py-comment"># Directorio para los archivos</tt> </tt>
<a name="L93"></a><tt class="py-lineno"> 93</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">working_dir</tt><tt class="py-op">=</tt><tt class="py-name">working_dir</tt> </tt>
<a name="L94"></a><tt class="py-lineno"> 94</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">txt_dir</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'txt'</tt><tt class="py-op">)</tt> </tt>
<a name="L95"></a><tt class="py-lineno"> 95</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">parsed_files_dir</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'parsed'</tt><tt class="py-op">)</tt> </tt>
<a name="L96"></a><tt class="py-lineno"> 96</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bioscope_files_dir</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'bioscope'</tt><tt class="py-op">)</tt> </tt>
<a name="L97"></a><tt class="py-lineno"> 97</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">event_dir</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'event'</tt><tt class="py-op">)</tt> </tt>
<a name="L98"></a><tt class="py-lineno"> 98</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">genia_files_dir</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'genia'</tt><tt class="py-op">)</tt> </tt>
<a name="L99"></a><tt class="py-lineno"> 99</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">att_dir</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'attributes'</tt><tt class="py-op">)</tt> </tt>
<a name="L100"></a><tt class="py-lineno">100</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">genia_articles_dir</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'genia_articles'</tt><tt class="py-op">)</tt> </tt>
<a name="L101"></a><tt class="py-lineno">101</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">image_files_dir</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'img'</tt><tt class="py-op">)</tt> </tt>
<a name="L102"></a><tt class="py-lineno">102</tt>  <tt class="py-line"> </tt>
<a name="L103"></a><tt class="py-lineno">103</tt>  <tt class="py-line">         </tt>
<a name="L104"></a><tt class="py-lineno">104</tt>  <tt class="py-line">                <tt class="py-comment"># Archivo temporal para an&#225;lisis con genia, y su resultado</tt> </tt>
<a name="L105"></a><tt class="py-lineno">105</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">genia_temp_file</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'genia_temp.txt'</tt><tt class="py-op">)</tt> </tt>
<a name="L106"></a><tt class="py-lineno">106</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">genia_temp_results_file</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'genia_temp.genia'</tt><tt class="py-op">)</tt> </tt>
<a name="L107"></a><tt class="py-lineno">107</tt>  <tt class="py-line">                 </tt>
<a name="L108"></a><tt class="py-lineno">108</tt>  <tt class="py-line">                 </tt>
<a name="L109"></a><tt class="py-lineno">109</tt>  <tt class="py-line">                <tt class="py-comment"># Directorio con la instalaci&#243;n de genia</tt> </tt>
<a name="L110"></a><tt class="py-lineno">110</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">genia_home</tt><tt class="py-op">=</tt><tt class="py-name">genia_home</tt> </tt>
<a name="L111"></a><tt class="py-lineno">111</tt>  <tt class="py-line">                 </tt>
<a name="L112"></a><tt class="py-lineno">112</tt>  <tt class="py-line">                 </tt>
<a name="L113"></a><tt class="py-lineno">113</tt>  <tt class="py-line">                <tt class="py-comment"># Ubicaci&#243;n del corpus Genia Event</tt> </tt>
<a name="L114"></a><tt class="py-lineno">114</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">genia_event_corpus_dir</tt><tt class="py-op">=</tt><tt class="py-name">genia_event_corpus_dir</tt> </tt>
<a name="L115"></a><tt class="py-lineno">115</tt>  <tt class="py-line">                 </tt>
<a name="L116"></a><tt class="py-lineno">116</tt>  <tt class="py-line">                <tt class="py-comment"># Gram&#225;tica para el parser de Stanford</tt> </tt>
<a name="L117"></a><tt class="py-lineno">117</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">parser_grammar_file</tt><tt class="py-op">=</tt><tt class="py-name">parser_grammar_file</tt> </tt>
<a name="L118"></a><tt class="py-lineno">118</tt>  <tt class="py-line">                 </tt>
<a name="L119"></a><tt class="py-lineno">119</tt>  <tt class="py-line">         </tt>
<a name="L120"></a><tt class="py-lineno">120</tt>  <tt class="py-line">                <tt class="py-comment"># Corpus XML a leer</tt> </tt>
<a name="L121"></a><tt class="py-lineno">121</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">original_bioscope_corpus</tt><tt class="py-op">=</tt><tt class="py-name">nltk</tt><tt class="py-op">.</tt><tt class="py-name">corpus</tt><tt class="py-op">.</tt><tt class="py-name">XMLCorpusReader</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'.\*\.xml'</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">xml</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_xml_file</tt><tt class="py-op">)</tt> </tt>
<a name="L122"></a><tt class="py-lineno">122</tt>  <tt class="py-line">         </tt>
<a name="L123"></a><tt class="py-lineno">123</tt>  <tt class="py-line">                <tt class="py-comment"># Corpus de archivos .bioscope</tt> </tt>
<a name="L124"></a><tt class="py-lineno">124</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bioscope_files_corpus</tt><tt class="py-op">=</tt><tt class="py-name">nltk</tt><tt class="py-op">.</tt><tt class="py-name">corpus</tt><tt class="py-op">.</tt><tt class="py-name">XMLCorpusReader</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bioscope_files_dir</tt><tt class="py-op">,</tt><tt class="py-string">'.\*\.bioscope'</tt><tt class="py-op">)</tt> </tt>
<a name="L125"></a><tt class="py-lineno">125</tt>  <tt class="py-line">                 </tt>
<a name="L126"></a><tt class="py-lineno">126</tt>  <tt class="py-line">                <tt class="py-comment"># Corpus de archivos .parsed</tt> </tt>
<a name="L127"></a><tt class="py-lineno">127</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">parsed_files_corpus</tt><tt class="py-op">=</tt><tt class="py-name">nltk</tt><tt class="py-op">.</tt><tt class="py-name">corpus</tt><tt class="py-op">.</tt><tt class="py-name">BracketParseCorpusReader</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">parsed_files_dir</tt><tt class="py-op">,</tt><tt class="py-string">'.\*\.parsed'</tt><tt class="py-op">)</tt> </tt>
<a name="L128"></a><tt class="py-lineno">128</tt>  <tt class="py-line">                 </tt>
<a name="L129"></a><tt class="py-lineno">129</tt>  <tt class="py-line">                <tt class="py-comment"># Corpus de archivos .genia</tt> </tt>
<a name="L130"></a><tt class="py-lineno">130</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">genia_files_corpus</tt><tt class="py-op">=</tt><tt class="py-name">nltk</tt><tt class="py-op">.</tt><tt class="py-name">corpus</tt><tt class="py-op">.</tt><tt class="py-name">WordListCorpusReader</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">genia_files_dir</tt><tt class="py-op">,</tt><tt class="py-string">'\.\*\.genia'</tt><tt class="py-op">)</tt> </tt>
<a name="L131"></a><tt class="py-lineno">131</tt>  <tt class="py-line">                 </tt>
<a name="L132"></a><tt class="py-lineno">132</tt>  <tt class="py-line">                <tt class="py-comment"># Base de datos SQLite para guardar los atributos</tt> </tt>
<a name="L133"></a><tt class="py-lineno">133</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">att_database</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">working_dir</tt><tt class="py-op">,</tt><tt class="py-string">'attributes.db'</tt><tt class="py-op">)</tt><tt class="py-op">;</tt> </tt>
</div><a name="L134"></a><tt class="py-lineno">134</tt>  <tt class="py-line"> </tt>
<a name="L135"></a><tt class="py-lineno">135</tt>  <tt class="py-line">                 </tt>
<a name="BioscopeCorpusProcessor.get_doc_ids"></a><div id="BioscopeCorpusProcessor.get_doc_ids-def"><a name="L136"></a><tt class="py-lineno">136</tt> <a class="py-toggle" href="#" id="BioscopeCorpusProcessor.get_doc_ids-toggle" onclick="return toggle('BioscopeCorpusProcessor.get_doc_ids');">-</a><tt class="py-line">        <tt class="py-keyword">def</tt> <a class="py-def-name" href="pln_inco.bioscope.util.BioscopeCorpusProcessor-class.html#get_doc_ids">get_doc_ids</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">prefix</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="BioscopeCorpusProcessor.get_doc_ids-collapsed" style="display:none;" pad="+++" indent="++++++++++++"></div><div id="BioscopeCorpusProcessor.get_doc_ids-expanded"><a name="L137"></a><tt class="py-lineno">137</tt>  <tt class="py-line">                <tt class="py-docstring">""" </tt> </tt>
<a name="L138"></a><tt class="py-lineno">138</tt>  <tt class="py-line"><tt class="py-docstring">                Devuelve una lista con los identificadores de documentos del corpus</tt> </tt>
<a name="L139"></a><tt class="py-lineno">139</tt>  <tt class="py-line"><tt class="py-docstring">                @arg prefix: prefijo que se desea agregar al identificador</tt> </tt>
<a name="L140"></a><tt class="py-lineno">140</tt>  <tt class="py-line"><tt class="py-docstring">                @type prefix: C{String}</tt> </tt>
<a name="L141"></a><tt class="py-lineno">141</tt>  <tt class="py-line"><tt class="py-docstring">                @rtype: C{List}</tt> </tt>
<a name="L142"></a><tt class="py-lineno">142</tt>  <tt class="py-line"><tt class="py-docstring">                </tt> </tt>
<a name="L143"></a><tt class="py-lineno">143</tt>  <tt class="py-line"><tt class="py-docstring">                """</tt> </tt>
<a name="L144"></a><tt class="py-lineno">144</tt>  <tt class="py-line">                 </tt>
<a name="L145"></a><tt class="py-lineno">145</tt>  <tt class="py-line">                <tt class="py-name">ids</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L146"></a><tt class="py-lineno">146</tt>  <tt class="py-line">                <tt class="py-keyword">for</tt> <tt class="py-name">docset</tt> <tt class="py-keyword">in</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">original_bioscope_corpus</tt><tt class="py-op">.</tt><tt class="py-name">getchildren</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> <tt class="py-comment"># Recorro los document set (en este caso es uno solo)                </tt> </tt>
<a name="L147"></a><tt class="py-lineno">147</tt>  <tt class="py-line">                        <tt class="py-keyword">for</tt> <tt class="py-name">doc</tt> <tt class="py-keyword">in</tt> <tt class="py-name">docset</tt><tt class="py-op">.</tt><tt class="py-name">getchildren</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> <tt class="py-comment"># Recorro los documentos                       </tt> </tt>
<a name="L148"></a><tt class="py-lineno">148</tt>  <tt class="py-line">                                <tt class="py-name">docId</tt><tt class="py-op">=</tt><tt class="py-name">doc</tt><tt class="py-op">.</tt><tt class="py-name">getchildren</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">text</tt>  </tt>
<a name="L149"></a><tt class="py-lineno">149</tt>  <tt class="py-line">                                <tt class="py-name">ids</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">prefix</tt><tt class="py-op">+</tt><tt class="py-name">docId</tt><tt class="py-op">)</tt> </tt>
<a name="L150"></a><tt class="py-lineno">150</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">ids</tt> </tt>
</div><a name="L151"></a><tt class="py-lineno">151</tt>  <tt class="py-line">         </tt>
<a name="BioscopeCorpusProcessor.get_sentence_ids"></a><div id="BioscopeCorpusProcessor.get_sentence_ids-def"><a name="L152"></a><tt class="py-lineno">152</tt> <a class="py-toggle" href="#" id="BioscopeCorpusProcessor.get_sentence_ids-toggle" onclick="return toggle('BioscopeCorpusProcessor.get_sentence_ids');">-</a><tt class="py-line">        <tt class="py-keyword">def</tt> <a class="py-def-name" href="pln_inco.bioscope.util.BioscopeCorpusProcessor-class.html#get_sentence_ids">get_sentence_ids</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">docId</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="BioscopeCorpusProcessor.get_sentence_ids-collapsed" style="display:none;" pad="+++" indent="++++++++++++"></div><div id="BioscopeCorpusProcessor.get_sentence_ids-expanded"><a name="L153"></a><tt class="py-lineno">153</tt>  <tt class="py-line">                <tt class="py-docstring">""" </tt> </tt>
<a name="L154"></a><tt class="py-lineno">154</tt>  <tt class="py-line"><tt class="py-docstring">                Dado un documento, devuelve una lista con los identificadores de oraciones en un documento del corpus </tt> </tt>
<a name="L155"></a><tt class="py-lineno">155</tt>  <tt class="py-line"><tt class="py-docstring">                @rtype:C{List}</tt> </tt>
<a name="L156"></a><tt class="py-lineno">156</tt>  <tt class="py-line"><tt class="py-docstring">                </tt> </tt>
<a name="L157"></a><tt class="py-lineno">157</tt>  <tt class="py-line"><tt class="py-docstring">                """</tt> </tt>
<a name="L158"></a><tt class="py-lineno">158</tt>  <tt class="py-line">                 </tt>
<a name="L159"></a><tt class="py-lineno">159</tt>  <tt class="py-line">                <tt class="py-comment"># Abro el archivo .bioscope correspondiente al documento</tt> </tt>
<a name="L160"></a><tt class="py-lineno">160</tt>  <tt class="py-line">                <tt class="py-name">bioscope_doc</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bioscope_files_corpus</tt><tt class="py-op">.</tt><tt class="py-name">xml</tt><tt class="py-op">(</tt><tt class="py-name">docId</tt><tt class="py-op">+</tt><tt class="py-string">'.bioscope'</tt><tt class="py-op">)</tt> </tt>
<a name="L161"></a><tt class="py-lineno">161</tt>  <tt class="py-line">                <tt class="py-name">ids</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L162"></a><tt class="py-lineno">162</tt>  <tt class="py-line">                <tt class="py-keyword">for</tt> <tt class="py-name">sentence</tt> <tt class="py-keyword">in</tt> <tt class="py-name">bioscope_doc</tt><tt class="py-op">.</tt><tt class="py-name">getchildren</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L163"></a><tt class="py-lineno">163</tt>  <tt class="py-line">                        <tt class="py-name">ids</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">sentence</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'id'</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L164"></a><tt class="py-lineno">164</tt>  <tt class="py-line">                 </tt>
<a name="L165"></a><tt class="py-lineno">165</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">ids</tt>                                                       </tt>
</div><a name="L166"></a><tt class="py-lineno">166</tt>  <tt class="py-line">                         </tt>
<a name="BioscopeCorpusProcessor.load_parsed_sentences"></a><div id="BioscopeCorpusProcessor.load_parsed_sentences-def"><a name="L167"></a><tt class="py-lineno">167</tt> <a class="py-toggle" href="#" id="BioscopeCorpusProcessor.load_parsed_sentences-toggle" onclick="return toggle('BioscopeCorpusProcessor.load_parsed_sentences');">-</a><tt class="py-line">        <tt class="py-keyword">def</tt> <a class="py-def-name" href="pln_inco.bioscope.util.BioscopeCorpusProcessor-class.html#load_parsed_sentences">load_parsed_sentences</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">docId</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="BioscopeCorpusProcessor.load_parsed_sentences-collapsed" style="display:none;" pad="+++" indent="++++++++++++"></div><div id="BioscopeCorpusProcessor.load_parsed_sentences-expanded"><a name="L168"></a><tt class="py-lineno">168</tt>  <tt class="py-line">                <tt class="py-docstring">""" </tt> </tt>
<a name="L169"></a><tt class="py-lineno">169</tt>  <tt class="py-line"><tt class="py-docstring">                Devuelve una lista de &#225;rboles de parsing, correspondientes a las oraciones del documento</tt> </tt>
<a name="L170"></a><tt class="py-lineno">170</tt>  <tt class="py-line"><tt class="py-docstring">                Vienen ordenadas como aparecen en el archivo</tt> </tt>
<a name="L171"></a><tt class="py-lineno">171</tt>  <tt class="py-line"><tt class="py-docstring">                @rtype: C{List}</tt> </tt>
<a name="L172"></a><tt class="py-lineno">172</tt>  <tt class="py-line"><tt class="py-docstring">                """</tt> </tt>
<a name="L173"></a><tt class="py-lineno">173</tt>  <tt class="py-line">                 </tt>
<a name="L174"></a><tt class="py-lineno">174</tt>  <tt class="py-line">                <tt class="py-comment"># Lo primero que hace es parsear el documento, solamente si el documento tiene alguna marca de incertidumbre</tt> </tt>
<a name="L175"></a><tt class="py-lineno">175</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">parsed_files_corpus</tt><tt class="py-op">.</tt><tt class="py-name">parsed_sents</tt><tt class="py-op">(</tt><tt class="py-name">docId</tt><tt class="py-op">+</tt><tt class="py-string">'.parsed'</tt><tt class="py-op">)</tt> </tt>
</div><a name="L176"></a><tt class="py-lineno">176</tt>  <tt class="py-line">                 </tt>
<a name="L177"></a><tt class="py-lineno">177</tt>  <tt class="py-line">                 </tt>
<a name="BioscopeCorpusProcessor.get_genia_words"></a><div id="BioscopeCorpusProcessor.get_genia_words-def"><a name="L178"></a><tt class="py-lineno">178</tt> <a class="py-toggle" href="#" id="BioscopeCorpusProcessor.get_genia_words-toggle" onclick="return toggle('BioscopeCorpusProcessor.get_genia_words');">-</a><tt class="py-line">        <tt class="py-keyword">def</tt> <a class="py-def-name" href="pln_inco.bioscope.util.BioscopeCorpusProcessor-class.html#get_genia_words">get_genia_words</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">docId</tt><tt class="py-op">,</tt><tt class="py-param">sentenceId</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="BioscopeCorpusProcessor.get_genia_words-collapsed" style="display:none;" pad="+++" indent="++++++++++++"></div><div id="BioscopeCorpusProcessor.get_genia_words-expanded"><a name="L179"></a><tt class="py-lineno">179</tt>  <tt class="py-line">                <tt class="py-docstring">""" </tt> </tt>
<a name="L180"></a><tt class="py-lineno">180</tt>  <tt class="py-line"><tt class="py-docstring">                Devuelve una lista de (word,lemma,pos,chunk,ne) a partir de lo generado por el tagger de Genia </tt> </tt>
<a name="L181"></a><tt class="py-lineno">181</tt>  <tt class="py-line"><tt class="py-docstring">                para el documento y oraci&#243;n correspondiente.</tt> </tt>
<a name="L182"></a><tt class="py-lineno">182</tt>  <tt class="py-line"><tt class="py-docstring">                @rtype: C{List}</tt> </tt>
<a name="L183"></a><tt class="py-lineno">183</tt>  <tt class="py-line"><tt class="py-docstring">                """</tt> </tt>
<a name="L184"></a><tt class="py-lineno">184</tt>  <tt class="py-line">                <tt class="py-name">genia_raw_words</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">genia_files_corpus</tt><tt class="py-op">.</tt><tt class="py-name">words</tt><tt class="py-op">(</tt><tt class="py-name">docId</tt><tt class="py-op">+</tt><tt class="py-string">'.'</tt><tt class="py-op">+</tt><tt class="py-name">sentenceId</tt><tt class="py-op">+</tt><tt class="py-string">'.genia'</tt><tt class="py-op">)</tt> </tt>
<a name="L185"></a><tt class="py-lineno">185</tt>  <tt class="py-line">                <tt class="py-name">genia_words</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L186"></a><tt class="py-lineno">186</tt>  <tt class="py-line">                <tt class="py-keyword">for</tt> <tt class="py-name">word</tt> <tt class="py-keyword">in</tt> <tt class="py-name">genia_raw_words</tt><tt class="py-op">:</tt> </tt>
<a name="L187"></a><tt class="py-lineno">187</tt>  <tt class="py-line">                        <tt class="py-op">(</tt><tt class="py-name">word</tt><tt class="py-op">,</tt><tt class="py-name">lemma</tt><tt class="py-op">,</tt><tt class="py-name">pos</tt><tt class="py-op">,</tt><tt class="py-name">chunk</tt><tt class="py-op">,</tt><tt class="py-name">ne</tt><tt class="py-op">)</tt><tt class="py-op">=</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-name">rstrip</tt><tt class="py-op">(</tt><tt class="py-name">word</tt><tt class="py-op">,</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">linesep</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-string">'\t'</tt><tt class="py-op">)</tt>            </tt>
<a name="L188"></a><tt class="py-lineno">188</tt>  <tt class="py-line">                        <tt class="py-name">genia_words</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">word</tt><tt class="py-op">,</tt><tt class="py-name">lemma</tt><tt class="py-op">,</tt><tt class="py-name">pos</tt><tt class="py-op">,</tt><tt class="py-name">chunk</tt><tt class="py-op">,</tt><tt class="py-name">ne</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L189"></a><tt class="py-lineno">189</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">genia_words</tt> </tt>
</div><a name="L190"></a><tt class="py-lineno">190</tt>  <tt class="py-line">                 </tt>
<a name="L191"></a><tt class="py-lineno">191</tt>  <tt class="py-line">         </tt>
<a name="L192"></a><tt class="py-lineno">192</tt>  <tt class="py-line">         </tt>
<a name="L193"></a><tt class="py-lineno">193</tt>  <tt class="py-line">                         </tt>
<a name="L194"></a><tt class="py-lineno">194</tt>  <tt class="py-line">                 </tt>
<a name="BioscopeCorpusProcessor.get_levels"></a><div id="BioscopeCorpusProcessor.get_levels-def"><a name="L195"></a><tt class="py-lineno">195</tt> <a class="py-toggle" href="#" id="BioscopeCorpusProcessor.get_levels-toggle" onclick="return toggle('BioscopeCorpusProcessor.get_levels');">-</a><tt class="py-line">        <tt class="py-keyword">def</tt> <a class="py-def-name" href="pln_inco.bioscope.util.BioscopeCorpusProcessor-class.html#get_levels">get_levels</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">docId</tt><tt class="py-op">,</tt><tt class="py-param">sentenceId</tt><tt class="py-op">,</tt><tt class="py-param">scope_type</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="BioscopeCorpusProcessor.get_levels-collapsed" style="display:none;" pad="+++" indent="++++++++++++"></div><div id="BioscopeCorpusProcessor.get_levels-expanded"><a name="L196"></a><tt class="py-lineno">196</tt>  <tt class="py-line">                <tt class="py-docstring">"""</tt> </tt>
<a name="L197"></a><tt class="py-lineno">197</tt>  <tt class="py-line"><tt class="py-docstring">                Dada una oraci&#243;n, devuelve la cantidad de niveles m&#225;ximo de anidamiento para los hedges. </tt> </tt>
<a name="L198"></a><tt class="py-lineno">198</tt>  <tt class="py-line"><tt class="py-docstring">                @rtype: Int</tt> </tt>
<a name="L199"></a><tt class="py-lineno">199</tt>  <tt class="py-line"><tt class="py-docstring">                """</tt> </tt>
<a name="L200"></a><tt class="py-lineno">200</tt>  <tt class="py-line">                 </tt>
<a name="L201"></a><tt class="py-lineno">201</tt>  <tt class="py-line"> </tt>
<a name="L202"></a><tt class="py-lineno">202</tt>  <tt class="py-line">                <tt class="py-keyword">def</tt> <tt class="py-def-name">includes_hedging_or_negation</tt><tt class="py-op">(</tt><tt class="py-param">element</tt><tt class="py-op">,</tt><tt class="py-param">xcope_id</tt><tt class="py-op">,</tt><tt class="py-param">scope_type</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L203"></a><tt class="py-lineno">203</tt>  <tt class="py-line">                        <tt class="py-docstring">"""</tt> </tt>
<a name="L204"></a><tt class="py-lineno">204</tt>  <tt class="py-line"><tt class="py-docstring">                        Dado un elemento del arbol xml de bioscope (C{xml.etree.ElementTree}), devuelve True si corresponde a un scope de hedging o de negaci&#243;n</tt> </tt>
<a name="L205"></a><tt class="py-lineno">205</tt>  <tt class="py-line"><tt class="py-docstring">                        @type element: C{xml.etree.ElementTree}         </tt> </tt>
<a name="L206"></a><tt class="py-lineno">206</tt>  <tt class="py-line"><tt class="py-docstring">                        @rtype: Bool</tt> </tt>
<a name="L207"></a><tt class="py-lineno">207</tt>  <tt class="py-line"><tt class="py-docstring">                        @type scope_type: String</tt> </tt>
<a name="L208"></a><tt class="py-lineno">208</tt>  <tt class="py-line"><tt class="py-docstring">                        """</tt> </tt>
<a name="L209"></a><tt class="py-lineno">209</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt id="link-4" class="py-name" targets="Function pln_inco.genia_tagger.tag()=pln_inco.genia_tagger-module.html#tag"><a title="pln_inco.genia_tagger.tag" class="py-name" href="#" onclick="return doclink('link-4', 'tag', 'link-4');">tag</a></tt><tt class="py-op">==</tt><tt class="py-string">'cue'</tt> <tt class="py-keyword">and</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'type'</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-name">scope_type</tt> <tt class="py-keyword">and</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'ref'</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-name">xcope_id</tt><tt class="py-op">:</tt> </tt>
<a name="L210"></a><tt class="py-lineno">210</tt>  <tt class="py-line">                                <tt class="py-keyword">return</tt> <tt class="py-name">True</tt> </tt>
<a name="L211"></a><tt class="py-lineno">211</tt>  <tt class="py-line">                        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L212"></a><tt class="py-lineno">212</tt>  <tt class="py-line">                                <tt class="py-keyword">for</tt> <tt class="py-name">ch</tt> <tt class="py-keyword">in</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">getchildren</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L213"></a><tt class="py-lineno">213</tt>  <tt class="py-line">                                        <tt class="py-keyword">if</tt> <tt class="py-name">includes_hedging_or_negation</tt><tt class="py-op">(</tt><tt class="py-name">ch</tt><tt class="py-op">,</tt><tt class="py-name">xcope_id</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L214"></a><tt class="py-lineno">214</tt>  <tt class="py-line">                                                <tt class="py-keyword">return</tt> <tt class="py-name">True</tt> </tt>
<a name="L215"></a><tt class="py-lineno">215</tt>  <tt class="py-line">                                <tt class="py-keyword">return</tt> <tt class="py-name">False</tt> </tt>
</div><a name="L216"></a><tt class="py-lineno">216</tt>  <tt class="py-line"> </tt>
<a name="L217"></a><tt class="py-lineno">217</tt>  <tt class="py-line"> </tt>
<a name="L218"></a><tt class="py-lineno">218</tt>  <tt class="py-line">                <tt class="py-keyword">def</tt> <tt class="py-def-name">get_bioscope_element_hedge_or_negation_levels</tt><tt class="py-op">(</tt><tt class="py-param">element</tt><tt class="py-op">,</tt><tt class="py-param">scope_type</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L219"></a><tt class="py-lineno">219</tt>  <tt class="py-line">                        <tt class="py-docstring">"""</tt> </tt>
<a name="L220"></a><tt class="py-lineno">220</tt>  <tt class="py-line"><tt class="py-docstring">                        Dado un elemento del arbol xml de bioscope (C{xml.etree.ElementTree}), devuelve el n&#250;mero de niveles de anidamiento de los hedges</tt> </tt>
<a name="L221"></a><tt class="py-lineno">221</tt>  <tt class="py-line"><tt class="py-docstring">                        @type element: C{xml.etree.ElementTree}         </tt> </tt>
<a name="L222"></a><tt class="py-lineno">222</tt>  <tt class="py-line"><tt class="py-docstring">                        @rtype: Int</tt> </tt>
<a name="L223"></a><tt class="py-lineno">223</tt>  <tt class="py-line"><tt class="py-docstring">                        """</tt> </tt>
<a name="L224"></a><tt class="py-lineno">224</tt>  <tt class="py-line">                 </tt>
<a name="L225"></a><tt class="py-lineno">225</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt id="link-5" class="py-name"><a title="pln_inco.genia_tagger.tag" class="py-name" href="#" onclick="return doclink('link-5', 'tag', 'link-4');">tag</a></tt><tt class="py-op">==</tt><tt class="py-string">'xcope'</tt> <tt class="py-keyword">and</tt> <tt class="py-name">includes_hedging_or_negation</tt><tt class="py-op">(</tt><tt class="py-name">element</tt><tt class="py-op">,</tt><tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'id'</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L226"></a><tt class="py-lineno">226</tt>  <tt class="py-line">                                <tt class="py-name">nested_levels</tt><tt class="py-op">=</tt><tt class="py-number">1</tt> </tt>
<a name="L227"></a><tt class="py-lineno">227</tt>  <tt class="py-line">                        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L228"></a><tt class="py-lineno">228</tt>  <tt class="py-line">                                <tt class="py-name">nested_levels</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L229"></a><tt class="py-lineno">229</tt>  <tt class="py-line"> </tt>
<a name="L230"></a><tt class="py-lineno">230</tt>  <tt class="py-line">                        <tt class="py-comment"># Sumo los niveles de hedge de los hijos</tt> </tt>
<a name="L231"></a><tt class="py-lineno">231</tt>  <tt class="py-line">                        <tt class="py-name">child_max_nested_levels</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L232"></a><tt class="py-lineno">232</tt>  <tt class="py-line">                        <tt class="py-keyword">for</tt> <tt class="py-name">ch</tt> <tt class="py-keyword">in</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">getchildren</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L233"></a><tt class="py-lineno">233</tt>  <tt class="py-line">                                        <tt class="py-keyword">if</tt> <tt class="py-name">get_bioscope_element_hedge_or_negation_levels</tt><tt class="py-op">(</tt><tt class="py-name">ch</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">)</tt> <tt class="py-op">&gt;</tt> <tt class="py-name">child_max_nested_levels</tt><tt class="py-op">:</tt> </tt>
<a name="L234"></a><tt class="py-lineno">234</tt>  <tt class="py-line">                                                <tt class="py-name">child_max_nested_levels</tt><tt class="py-op">=</tt><tt class="py-name">get_bioscope_element_hedge_or_negation_levels</tt><tt class="py-op">(</tt><tt class="py-name">ch</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">)</tt> </tt>
<a name="L235"></a><tt class="py-lineno">235</tt>  <tt class="py-line">                        <tt class="py-keyword">return</tt> <tt class="py-name">child_max_nested_levels</tt><tt class="py-op">+</tt><tt class="py-name">nested_levels</tt> </tt>
</div><a name="L236"></a><tt class="py-lineno">236</tt>  <tt class="py-line">                                         </tt>
<a name="L237"></a><tt class="py-lineno">237</tt>  <tt class="py-line">                <tt class="py-comment"># Abro el archivo .bioscope correspondiente al documento</tt> </tt>
<a name="L238"></a><tt class="py-lineno">238</tt>  <tt class="py-line">                <tt class="py-name">bioscope_doc</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bioscope_files_corpus</tt><tt class="py-op">.</tt><tt class="py-name">xml</tt><tt class="py-op">(</tt><tt class="py-name">docId</tt><tt class="py-op">+</tt><tt class="py-string">'.bioscope'</tt><tt class="py-op">)</tt> </tt>
<a name="L239"></a><tt class="py-lineno">239</tt>  <tt class="py-line">                <tt class="py-keyword">for</tt> <tt class="py-name">sentence</tt> <tt class="py-keyword">in</tt> <tt class="py-name">bioscope_doc</tt><tt class="py-op">.</tt><tt class="py-name">getchildren</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L240"></a><tt class="py-lineno">240</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">sentence</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'id'</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-name">sentenceId</tt><tt class="py-op">:</tt> </tt>
<a name="L241"></a><tt class="py-lineno">241</tt>  <tt class="py-line">                                <tt class="py-comment"># Proceso la oraci&#243;n y obtengo los tags de especulaci&#243;n</tt> </tt>
<a name="L242"></a><tt class="py-lineno">242</tt>  <tt class="py-line">                                <tt class="py-name">hedge_levels</tt><tt class="py-op">=</tt> <tt class="py-name">get_bioscope_element_hedge_or_negation_levels</tt><tt class="py-op">(</tt><tt class="py-name">sentence</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">)</tt> </tt>
<a name="L243"></a><tt class="py-lineno">243</tt>  <tt class="py-line"> </tt>
<a name="L244"></a><tt class="py-lineno">244</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">hedge_levels</tt> </tt>
</div><a name="L245"></a><tt class="py-lineno">245</tt>  <tt class="py-line">                 </tt>
<a name="BioscopeCorpusProcessor.get_bioscope_tokens"></a><div id="BioscopeCorpusProcessor.get_bioscope_tokens-def"><a name="L246"></a><tt class="py-lineno">246</tt> <a class="py-toggle" href="#" id="BioscopeCorpusProcessor.get_bioscope_tokens-toggle" onclick="return toggle('BioscopeCorpusProcessor.get_bioscope_tokens');">-</a><tt class="py-line">        <tt class="py-keyword">def</tt> <a class="py-def-name" href="pln_inco.bioscope.util.BioscopeCorpusProcessor-class.html#get_bioscope_tokens">get_bioscope_tokens</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">docId</tt><tt class="py-op">,</tt><tt class="py-param">sentenceId</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="BioscopeCorpusProcessor.get_bioscope_tokens-collapsed" style="display:none;" pad="+++" indent="++++++++++++"></div><div id="BioscopeCorpusProcessor.get_bioscope_tokens-expanded"><a name="L247"></a><tt class="py-lineno">247</tt>  <tt class="py-line">                <tt class="py-docstring">"""</tt> </tt>
<a name="L248"></a><tt class="py-lineno">248</tt>  <tt class="py-line"><tt class="py-docstring">                Dada una oraci&#243;n, la obtiene a partir del documento original, y la tokeniza (utilizando C{nltk.tokenize.TreebankWordTokenizer}).</tt> </tt>
<a name="L249"></a><tt class="py-lineno">249</tt>  <tt class="py-line"><tt class="py-docstring">                Devuelve una lista de pares propiedad:valor para cada token.</tt> </tt>
<a name="L250"></a><tt class="py-lineno">250</tt>  <tt class="py-line"><tt class="py-docstring">                @rtype: C{List}</tt> </tt>
<a name="L251"></a><tt class="py-lineno">251</tt>  <tt class="py-line"><tt class="py-docstring">                """</tt> </tt>
<a name="L252"></a><tt class="py-lineno">252</tt>  <tt class="py-line"> </tt>
<a name="L253"></a><tt class="py-lineno">253</tt>  <tt class="py-line"> </tt>
<a name="L254"></a><tt class="py-lineno">254</tt>  <tt class="py-line"> </tt>
<a name="L255"></a><tt class="py-lineno">255</tt>  <tt class="py-line">                <tt class="py-comment"># Obtengo el nivel m&#225;ximo de hedging en la oraci&#243;n</tt> </tt>
<a name="L256"></a><tt class="py-lineno">256</tt>  <tt class="py-line">                <tt class="py-name">max_hedge_levels</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-6" class="py-name" targets="Method pln_inco.bioscope.util.BioscopeCorpusProcessor.get_levels()=pln_inco.bioscope.util.BioscopeCorpusProcessor-class.html#get_levels"><a title="pln_inco.bioscope.util.BioscopeCorpusProcessor.get_levels" class="py-name" href="#" onclick="return doclink('link-6', 'get_levels', 'link-6');">get_levels</a></tt><tt class="py-op">(</tt><tt class="py-name">docId</tt><tt class="py-op">,</tt><tt class="py-name">sentenceId</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">=</tt><tt class="py-string">'speculation'</tt><tt class="py-op">)</tt> </tt>
<a name="L257"></a><tt class="py-lineno">257</tt>  <tt class="py-line">                <tt class="py-name">hedge_scopes</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">range</tt><tt class="py-op">(</tt><tt class="py-name">max_hedge_levels</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L258"></a><tt class="py-lineno">258</tt>  <tt class="py-line">                <tt class="py-name">max_negation_levels</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-7" class="py-name"><a title="pln_inco.bioscope.util.BioscopeCorpusProcessor.get_levels" class="py-name" href="#" onclick="return doclink('link-7', 'get_levels', 'link-6');">get_levels</a></tt><tt class="py-op">(</tt><tt class="py-name">docId</tt><tt class="py-op">,</tt><tt class="py-name">sentenceId</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">=</tt><tt class="py-string">'negation'</tt><tt class="py-op">)</tt> </tt>
<a name="L259"></a><tt class="py-lineno">259</tt>  <tt class="py-line">                <tt class="py-name">negation_scopes</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">range</tt><tt class="py-op">(</tt><tt class="py-name">max_negation_levels</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L260"></a><tt class="py-lineno">260</tt>  <tt class="py-line">                 </tt>
<a name="L261"></a><tt class="py-lineno">261</tt>  <tt class="py-line">                 </tt>
<a name="L262"></a><tt class="py-lineno">262</tt>  <tt class="py-line">                <tt class="py-keyword">def</tt> <tt class="py-def-name">includes_hedging_or_negation</tt><tt class="py-op">(</tt><tt class="py-param">element</tt><tt class="py-op">,</tt><tt class="py-param">xcope_id</tt><tt class="py-op">,</tt><tt class="py-param">scope_type</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L263"></a><tt class="py-lineno">263</tt>  <tt class="py-line">                        <tt class="py-docstring">"""</tt> </tt>
<a name="L264"></a><tt class="py-lineno">264</tt>  <tt class="py-line"><tt class="py-docstring">                        Dado un elemento del arbol xml de bioscope (C{xml.etree.ElementTree}), devuelve True si corresponde a un scope de hedging o de negaci&#243;n</tt> </tt>
<a name="L265"></a><tt class="py-lineno">265</tt>  <tt class="py-line"><tt class="py-docstring">                        @type element: C{xml.etree.ElementTree}         </tt> </tt>
<a name="L266"></a><tt class="py-lineno">266</tt>  <tt class="py-line"><tt class="py-docstring">                        @rtype: Bool</tt> </tt>
<a name="L267"></a><tt class="py-lineno">267</tt>  <tt class="py-line"><tt class="py-docstring">                        @type scope_type: String</tt> </tt>
<a name="L268"></a><tt class="py-lineno">268</tt>  <tt class="py-line"><tt class="py-docstring">                        """</tt> </tt>
<a name="L269"></a><tt class="py-lineno">269</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt id="link-8" class="py-name"><a title="pln_inco.genia_tagger.tag" class="py-name" href="#" onclick="return doclink('link-8', 'tag', 'link-4');">tag</a></tt><tt class="py-op">==</tt><tt class="py-string">'cue'</tt> <tt class="py-keyword">and</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'type'</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-name">scope_type</tt> <tt class="py-keyword">and</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'ref'</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-name">xcope_id</tt><tt class="py-op">:</tt> </tt>
<a name="L270"></a><tt class="py-lineno">270</tt>  <tt class="py-line">                                <tt class="py-keyword">return</tt> <tt class="py-name">True</tt> </tt>
<a name="L271"></a><tt class="py-lineno">271</tt>  <tt class="py-line">                        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L272"></a><tt class="py-lineno">272</tt>  <tt class="py-line">                                <tt class="py-keyword">for</tt> <tt class="py-name">ch</tt> <tt class="py-keyword">in</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">getchildren</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L273"></a><tt class="py-lineno">273</tt>  <tt class="py-line">                                        <tt class="py-keyword">if</tt> <tt class="py-name">includes_hedging_or_negation</tt><tt class="py-op">(</tt><tt class="py-name">ch</tt><tt class="py-op">,</tt><tt class="py-name">xcope_id</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L274"></a><tt class="py-lineno">274</tt>  <tt class="py-line">                                                <tt class="py-keyword">return</tt> <tt class="py-name">True</tt> </tt>
<a name="L275"></a><tt class="py-lineno">275</tt>  <tt class="py-line">         </tt>
<a name="L276"></a><tt class="py-lineno">276</tt>  <tt class="py-line">                                <tt class="py-keyword">return</tt> <tt class="py-name">False</tt> </tt>
</div><a name="L277"></a><tt class="py-lineno">277</tt>  <tt class="py-line">                 </tt>
<a name="L278"></a><tt class="py-lineno">278</tt>  <tt class="py-line">                 </tt>
<a name="L279"></a><tt class="py-lineno">279</tt>  <tt class="py-line">                <tt class="py-keyword">def</tt> <tt class="py-def-name">get_bioscope_element_spec_tags</tt><tt class="py-op">(</tt><tt class="py-param">element</tt><tt class="py-op">,</tt><tt class="py-param">hedge_cue_num</tt><tt class="py-op">,</tt><tt class="py-param">negation_cue_num</tt><tt class="py-op">,</tt><tt class="py-param">hedge_scopes</tt><tt class="py-op">,</tt><tt class="py-param">negation_scopes</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L280"></a><tt class="py-lineno">280</tt>  <tt class="py-line">                         </tt>
<a name="L281"></a><tt class="py-lineno">281</tt>  <tt class="py-line">                        <tt class="py-docstring">""" </tt> </tt>
<a name="L282"></a><tt class="py-lineno">282</tt>  <tt class="py-line"><tt class="py-docstring">                        Dada un elemento del &#225;rbol xml de bioscope (C{xml.etree.ElementTree}), devuelve las marcas correspondientes para anotar el documento</tt> </tt>
<a name="L283"></a><tt class="py-lineno">283</tt>  <tt class="py-line"><tt class="py-docstring">                        Adicionalmente, si es un texto, lo tokeniza.</tt> </tt>
<a name="L284"></a><tt class="py-lineno">284</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L285"></a><tt class="py-lineno">285</tt>  <tt class="py-line"><tt class="py-docstring">                        @type element: C{xml.etree.ElementTree}</tt> </tt>
<a name="L286"></a><tt class="py-lineno">286</tt>  <tt class="py-line"><tt class="py-docstring">                        @arg is_hedge_cue: indica si lo que hay en el elemento es una hedge cue. Este atributo cambia a True cuando el elemento tiene tag 'cue' y tipo 'speculation'</tt> </tt>
<a name="L287"></a><tt class="py-lineno">287</tt>  <tt class="py-line"><tt class="py-docstring">                        @type is_hedge_cue: Bool</tt> </tt>
<a name="L288"></a><tt class="py-lineno">288</tt>  <tt class="py-line"><tt class="py-docstring">                        @arg is_negation_cue: indica si lo que hay en el elmento es una cue de negaci&#243;n.  Este atributo cambia a True cuando el elemento tiene tag 'cue' y tipo 'negation'</tt> </tt>
<a name="L289"></a><tt class="py-lineno">289</tt>  <tt class="py-line"><tt class="py-docstring">                        @type is_negation_cue:Bool</tt> </tt>
<a name="L290"></a><tt class="py-lineno">290</tt>  <tt class="py-line"><tt class="py-docstring">                        @arg hedge_scopes: indica si estamos en alg&#250;n scope de hedging. Cada elemento del array en True indica que en ese nivel (y en los anteriores) hay hedging</tt> </tt>
<a name="L291"></a><tt class="py-lineno">291</tt>  <tt class="py-line"><tt class="py-docstring">                        @type hedge_scopes: List</tt> </tt>
<a name="L292"></a><tt class="py-lineno">292</tt>  <tt class="py-line"><tt class="py-docstring">                        @arg negation_scopes: indica si estamos en alg&#250;n scope de negaci&#243;n. Cada elemento del array en True indica que en ese nivel (y en los anteriores) hay negaci&#243;n</tt> </tt>
<a name="L293"></a><tt class="py-lineno">293</tt>  <tt class="py-line"><tt class="py-docstring">                        @type negation_scopes: List</tt> </tt>
<a name="L294"></a><tt class="py-lineno">294</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L295"></a><tt class="py-lineno">295</tt>  <tt class="py-line"><tt class="py-docstring">                        """</tt> </tt>
<a name="L296"></a><tt class="py-lineno">296</tt>  <tt class="py-line">                 </tt>
<a name="L297"></a><tt class="py-lineno">297</tt>  <tt class="py-line">                        <tt class="py-comment"># Tokenizador de acuerdo al Treebank, que es lo mismo que usa Genia... espero</tt> </tt>
<a name="L298"></a><tt class="py-lineno">298</tt>  <tt class="py-line">                        <tt class="py-name">wt</tt><tt class="py-op">=</tt><tt class="py-name">nltk</tt><tt class="py-op">.</tt><tt class="py-name">tokenize</tt><tt class="py-op">.</tt><tt class="py-name">TreebankWordTokenizer</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L299"></a><tt class="py-lineno">299</tt>  <tt class="py-line"> </tt>
<a name="L300"></a><tt class="py-lineno">300</tt>  <tt class="py-line">                        <tt class="py-comment">#print &gt;&gt; stderr, "Proceso el elemento ",element.tag, "con id=",element.get('id'), "de tipo ", element.get('type')</tt> </tt>
<a name="L301"></a><tt class="py-lineno">301</tt>  <tt class="py-line">                        <tt class="py-comment">#print &gt;&gt; stderr,'Texto:',element.text</tt> </tt>
<a name="L302"></a><tt class="py-lineno">302</tt>  <tt class="py-line">                         </tt>
<a name="L303"></a><tt class="py-lineno">303</tt>  <tt class="py-line">                        <tt class="py-comment"># Determino los atributos con los que voy a anotar a cada token</tt> </tt>
<a name="L304"></a><tt class="py-lineno">304</tt>  <tt class="py-line">                        <tt class="py-name">hedge_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">range</tt><tt class="py-op">(</tt><tt class="py-name">max_hedge_levels</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L305"></a><tt class="py-lineno">305</tt>  <tt class="py-line">                        <tt class="py-name">negation_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">range</tt><tt class="py-op">(</tt><tt class="py-name">max_negation_levels</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L306"></a><tt class="py-lineno">306</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt id="link-9" class="py-name"><a title="pln_inco.genia_tagger.tag" class="py-name" href="#" onclick="return doclink('link-9', 'tag', 'link-4');">tag</a></tt><tt class="py-op">==</tt><tt class="py-string">'sentence'</tt><tt class="py-op">:</tt> </tt>
<a name="L307"></a><tt class="py-lineno">307</tt>  <tt class="py-line">                                <tt class="py-comment"># Al comienzo de la oraci&#243;n, el tag de marca de especulaci&#243;n es Falso</tt> </tt>
<a name="L308"></a><tt class="py-lineno">308</tt>  <tt class="py-line">                                <tt class="py-comment"># El tag de marca de negaci&#243;n est&#225; vac&#237;o</tt> </tt>
<a name="L309"></a><tt class="py-lineno">309</tt>  <tt class="py-line">                                <tt class="py-comment"># La lista de scopes est&#225; vac&#237;a</tt> </tt>
<a name="L310"></a><tt class="py-lineno">310</tt>  <tt class="py-line">                                <tt class="py-name">hedge_scopes</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">hedge_scopes</tt><tt class="py-op">]</tt> </tt>
<a name="L311"></a><tt class="py-lineno">311</tt>  <tt class="py-line">                                <tt class="py-name">negation_scopes</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">negation_scopes</tt><tt class="py-op">]</tt> </tt>
<a name="L312"></a><tt class="py-lineno">312</tt>  <tt class="py-line">                                <tt class="py-name">hedge_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">hedge_cues</tt><tt class="py-op">]</tt> </tt>
<a name="L313"></a><tt class="py-lineno">313</tt>  <tt class="py-line">                                <tt class="py-name">negation_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">negation_cues</tt><tt class="py-op">]</tt> </tt>
<a name="L314"></a><tt class="py-lineno">314</tt>  <tt class="py-line">                        <tt class="py-keyword">elif</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt id="link-10" class="py-name"><a title="pln_inco.genia_tagger.tag" class="py-name" href="#" onclick="return doclink('link-10', 'tag', 'link-4');">tag</a></tt><tt class="py-op">==</tt><tt class="py-string">'cue'</tt> <tt class="py-keyword">and</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'type'</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-string">'negation'</tt><tt class="py-op">:</tt> </tt>
<a name="L315"></a><tt class="py-lineno">315</tt>  <tt class="py-line">                                <tt class="py-comment"># Si estoy en un cue de negaci&#243;n, no puedo estar en un cue de especulaci&#243;n</tt> </tt>
<a name="L316"></a><tt class="py-lineno">316</tt>  <tt class="py-line">                                <tt class="py-comment"># Pero s&#237; podr&#237;a estar dentro de un scope, as&#237; que el scope no cambia</tt> </tt>
<a name="L317"></a><tt class="py-lineno">317</tt>  <tt class="py-line">                                <tt class="py-comment">#hedge_cue_num=0</tt> </tt>
<a name="L318"></a><tt class="py-lineno">318</tt>  <tt class="py-line">                                <tt class="py-comment">#is_negation_cue=True</tt> </tt>
<a name="L319"></a><tt class="py-lineno">319</tt>  <tt class="py-line">                                <tt class="py-keyword">pass</tt> </tt>
<a name="L320"></a><tt class="py-lineno">320</tt>  <tt class="py-line">                        <tt class="py-keyword">elif</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt id="link-11" class="py-name"><a title="pln_inco.genia_tagger.tag" class="py-name" href="#" onclick="return doclink('link-11', 'tag', 'link-4');">tag</a></tt><tt class="py-op">==</tt><tt class="py-string">'cue'</tt> <tt class="py-keyword">and</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'type'</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-string">'speculation'</tt><tt class="py-op">:</tt> </tt>
<a name="L321"></a><tt class="py-lineno">321</tt>  <tt class="py-line">                                <tt class="py-comment"># Comienza un bloque de cue de especulaci&#243;n</tt> </tt>
<a name="L322"></a><tt class="py-lineno">322</tt>  <tt class="py-line">                                <tt class="py-comment"># Los elementos dentro de este scope est&#225;n marcados como de especulaci&#243;n</tt> </tt>
<a name="L323"></a><tt class="py-lineno">323</tt>  <tt class="py-line">                                <tt class="py-comment"># Esto no cambia nada los scopes</tt> </tt>
<a name="L324"></a><tt class="py-lineno">324</tt>  <tt class="py-line">                                <tt class="py-comment">#hedge_cue_num=hedge_cue_num+1</tt> </tt>
<a name="L325"></a><tt class="py-lineno">325</tt>  <tt class="py-line">                                <tt class="py-comment">#is_negation_cue=False                          </tt> </tt>
<a name="L326"></a><tt class="py-lineno">326</tt>  <tt class="py-line">                                <tt class="py-keyword">pass</tt> </tt>
<a name="L327"></a><tt class="py-lineno">327</tt>  <tt class="py-line">                        <tt class="py-keyword">elif</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt id="link-12" class="py-name"><a title="pln_inco.genia_tagger.tag" class="py-name" href="#" onclick="return doclink('link-12', 'tag', 'link-4');">tag</a></tt><tt class="py-op">==</tt><tt class="py-string">'xcope'</tt><tt class="py-op">:</tt> </tt>
<a name="L328"></a><tt class="py-lineno">328</tt>  <tt class="py-line">                                <tt class="py-comment"># Si estoy en un scope de especulaci&#243;n o negaci&#243;n , todav&#237;a no tengo indicador de marca de especulaci&#243;n (aunque seguramente est&#233; dentro del bloque)</tt> </tt>
<a name="L329"></a><tt class="py-lineno">329</tt>  <tt class="py-line">                                <tt class="py-comment"># Los elementos dentro de este tag van a tener marca de scope</tt> </tt>
<a name="L330"></a><tt class="py-lineno">330</tt>  <tt class="py-line">                                <tt class="py-comment">#hedge_cue_num=0</tt> </tt>
<a name="L331"></a><tt class="py-lineno">331</tt>  <tt class="py-line">                                <tt class="py-comment">#is_negation_cue=False                          </tt> </tt>
<a name="L332"></a><tt class="py-lineno">332</tt>  <tt class="py-line">                                 </tt>
<a name="L333"></a><tt class="py-lineno">333</tt>  <tt class="py-line">                                <tt class="py-comment"># Si es un hedge de scope, entonces aumento un nivel de anidamiento</tt> </tt>
<a name="L334"></a><tt class="py-lineno">334</tt>  <tt class="py-line">                                <tt class="py-comment"># Sino seguimos igual</tt> </tt>
<a name="L335"></a><tt class="py-lineno">335</tt>  <tt class="py-line">                                <tt class="py-keyword">if</tt> <tt class="py-name">includes_hedging_or_negation</tt><tt class="py-op">(</tt><tt class="py-name">element</tt><tt class="py-op">,</tt><tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'id'</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">=</tt><tt class="py-string">'speculation'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L336"></a><tt class="py-lineno">336</tt>  <tt class="py-line">                                        <tt class="py-name">hedge_cue_num</tt><tt class="py-op">=</tt><tt class="py-name">hedge_cue_num</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> </tt>
<a name="L337"></a><tt class="py-lineno">337</tt>  <tt class="py-line">                                        <tt class="py-comment"># Creo un nuevo nivel de hedging</tt> </tt>
<a name="L338"></a><tt class="py-lineno">338</tt>  <tt class="py-line">                                        <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L339"></a><tt class="py-lineno">339</tt>  <tt class="py-line">                                        <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">hedge_scopes</tt><tt class="py-op">:</tt> </tt>
<a name="L340"></a><tt class="py-lineno">340</tt>  <tt class="py-line">                                                <tt class="py-keyword">if</tt> <tt class="py-name">i</tt><tt class="py-op">!=</tt><tt class="py-string">'O'</tt><tt class="py-op">:</tt> </tt>
<a name="L341"></a><tt class="py-lineno">341</tt>  <tt class="py-line">                                                        <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-name">j</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> </tt>
<a name="L342"></a><tt class="py-lineno">342</tt>  <tt class="py-line">                                                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L343"></a><tt class="py-lineno">343</tt>  <tt class="py-line">                                                        <tt class="py-comment"># Sustituyo la primer 'O' por una 'B'</tt> </tt>
<a name="L344"></a><tt class="py-lineno">344</tt>  <tt class="py-line">                                                        <tt class="py-name">hedge_scopes</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'B'</tt> </tt>
<a name="L345"></a><tt class="py-lineno">345</tt>  <tt class="py-line">                                                        <tt class="py-keyword">break</tt> </tt>
<a name="L346"></a><tt class="py-lineno">346</tt>  <tt class="py-line">                                         </tt>
<a name="L347"></a><tt class="py-lineno">347</tt>  <tt class="py-line">                                <tt class="py-keyword">if</tt> <tt class="py-name">includes_hedging_or_negation</tt><tt class="py-op">(</tt><tt class="py-name">element</tt><tt class="py-op">,</tt><tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'id'</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">=</tt><tt class="py-string">'negation'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L348"></a><tt class="py-lineno">348</tt>  <tt class="py-line">                                        <tt class="py-name">negation_cue_num</tt><tt class="py-op">=</tt><tt class="py-name">negation_cue_num</tt><tt class="py-op">+</tt><tt class="py-number">1</tt>                              </tt>
<a name="L349"></a><tt class="py-lineno">349</tt>  <tt class="py-line">                                        <tt class="py-comment"># Creo un nuevo nivel de negation</tt> </tt>
<a name="L350"></a><tt class="py-lineno">350</tt>  <tt class="py-line">                                        <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L351"></a><tt class="py-lineno">351</tt>  <tt class="py-line">                                        <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">negation_scopes</tt><tt class="py-op">:</tt> </tt>
<a name="L352"></a><tt class="py-lineno">352</tt>  <tt class="py-line">                                                <tt class="py-keyword">if</tt> <tt class="py-name">i</tt><tt class="py-op">!=</tt><tt class="py-string">'O'</tt><tt class="py-op">:</tt> </tt>
<a name="L353"></a><tt class="py-lineno">353</tt>  <tt class="py-line">                                                        <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-name">j</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> </tt>
<a name="L354"></a><tt class="py-lineno">354</tt>  <tt class="py-line">                                                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L355"></a><tt class="py-lineno">355</tt>  <tt class="py-line">                                                        <tt class="py-comment"># Sustituyo la primer 'O' por una 'B'</tt> </tt>
<a name="L356"></a><tt class="py-lineno">356</tt>  <tt class="py-line">                                                        <tt class="py-name">negation_scopes</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'B'</tt> </tt>
<a name="L357"></a><tt class="py-lineno">357</tt>  <tt class="py-line">                                                        <tt class="py-keyword">break</tt> </tt>
<a name="L358"></a><tt class="py-lineno">358</tt>  <tt class="py-line"> </tt>
<a name="L359"></a><tt class="py-lineno">359</tt>  <tt class="py-line">                         </tt>
<a name="L360"></a><tt class="py-lineno">360</tt>  <tt class="py-line">                        <tt class="py-comment"># Si tiene texto asociado lo tokenizo y agrego los tags correspondientes a cada una de las palabras</tt> </tt>
<a name="L361"></a><tt class="py-lineno">361</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">text</tt><tt class="py-op">:</tt> </tt>
<a name="L362"></a><tt class="py-lineno">362</tt>  <tt class="py-line">                                <tt class="py-name">element_text</tt><tt class="py-op">=</tt><tt class="py-name">wt</tt><tt class="py-op">.</tt><tt class="py-name">tokenize</tt><tt class="py-op">(</tt><tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">text</tt><tt class="py-op">)</tt> </tt>
<a name="L363"></a><tt class="py-lineno">363</tt>  <tt class="py-line">                        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L364"></a><tt class="py-lineno">364</tt>  <tt class="py-line">                                <tt class="py-name">element_text</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L365"></a><tt class="py-lineno">365</tt>  <tt class="py-line">                                 </tt>
<a name="L366"></a><tt class="py-lineno">366</tt>  <tt class="py-line">                        <tt class="py-name">element_tagged_text</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L367"></a><tt class="py-lineno">367</tt>  <tt class="py-line">                         </tt>
<a name="L368"></a><tt class="py-lineno">368</tt>  <tt class="py-line">                        <tt class="py-comment">#print &gt;&gt; stderr, 'Texto a tokenizar:',element.text</tt> </tt>
<a name="L369"></a><tt class="py-lineno">369</tt>  <tt class="py-line"> </tt>
<a name="L370"></a><tt class="py-lineno">370</tt>  <tt class="py-line">                        <tt class="py-name">first_token</tt><tt class="py-op">=</tt><tt class="py-name">True</tt> </tt>
<a name="L371"></a><tt class="py-lineno">371</tt>  <tt class="py-line">                        <tt class="py-keyword">for</tt> <tt class="py-name">elem</tt> <tt class="py-keyword">in</tt> <tt class="py-name">element_text</tt><tt class="py-op">:</tt> </tt>
<a name="L372"></a><tt class="py-lineno">372</tt>  <tt class="py-line">                                 </tt>
<a name="L373"></a><tt class="py-lineno">373</tt>  <tt class="py-line">                                <tt class="py-comment"># Cargo el valor de marca de especulaci&#243;n</tt> </tt>
<a name="L374"></a><tt class="py-lineno">374</tt>  <tt class="py-line">                                 </tt>
<a name="L375"></a><tt class="py-lineno">375</tt>  <tt class="py-line">                                <tt class="py-keyword">if</tt> <tt class="py-name">hedge_cue_num</tt><tt class="py-op">&gt;</tt><tt class="py-number">0</tt> <tt class="py-keyword">and</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'type'</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-string">'speculation'</tt><tt class="py-op">:</tt> </tt>
<a name="L376"></a><tt class="py-lineno">376</tt>  <tt class="py-line">                                        <tt class="py-keyword">if</tt> <tt class="py-name">first_token</tt><tt class="py-op">:</tt> </tt>
<a name="L377"></a><tt class="py-lineno">377</tt>  <tt class="py-line">                                                <tt class="py-name">hedge_cues</tt><tt class="py-op">[</tt><tt class="py-name">hedge_cue_num</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'B-SPECCUE'</tt> </tt>
<a name="L378"></a><tt class="py-lineno">378</tt>  <tt class="py-line">                                                <tt class="py-name">first_token</tt><tt class="py-op">=</tt><tt class="py-name">False</tt> </tt>
<a name="L379"></a><tt class="py-lineno">379</tt>  <tt class="py-line">                                        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L380"></a><tt class="py-lineno">380</tt>  <tt class="py-line">                                                <tt class="py-name">hedge_cues</tt><tt class="py-op">[</tt><tt class="py-name">hedge_cue_num</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'I-SPECCUE'</tt> </tt>
<a name="L381"></a><tt class="py-lineno">381</tt>  <tt class="py-line">                                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L382"></a><tt class="py-lineno">382</tt>  <tt class="py-line">                                        <tt class="py-name">hedge_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">hedge_cues</tt><tt class="py-op">]</tt> </tt>
<a name="L383"></a><tt class="py-lineno">383</tt>  <tt class="py-line">                                         </tt>
<a name="L384"></a><tt class="py-lineno">384</tt>  <tt class="py-line">                                <tt class="py-comment"># Cargo el valor de marca de negaci&#243;n</tt> </tt>
<a name="L385"></a><tt class="py-lineno">385</tt>  <tt class="py-line">                                <tt class="py-keyword">if</tt> <tt class="py-name">negation_cue_num</tt><tt class="py-op">&gt;</tt><tt class="py-number">0</tt>  <tt class="py-keyword">and</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'type'</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-string">'negation'</tt><tt class="py-op">:</tt> </tt>
<a name="L386"></a><tt class="py-lineno">386</tt>  <tt class="py-line">                                        <tt class="py-keyword">if</tt> <tt class="py-name">first_token</tt><tt class="py-op">:</tt> </tt>
<a name="L387"></a><tt class="py-lineno">387</tt>  <tt class="py-line">                                                <tt class="py-name">negation_cues</tt><tt class="py-op">[</tt><tt class="py-name">negation_cue_num</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'B-NEGCUE'</tt> </tt>
<a name="L388"></a><tt class="py-lineno">388</tt>  <tt class="py-line">                                                <tt class="py-name">first_token</tt><tt class="py-op">=</tt><tt class="py-name">False</tt> </tt>
<a name="L389"></a><tt class="py-lineno">389</tt>  <tt class="py-line">                                        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L390"></a><tt class="py-lineno">390</tt>  <tt class="py-line">                                                <tt class="py-name">negation_cues</tt><tt class="py-op">[</tt><tt class="py-name">negation_cue_num</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'I-NEGCUE'</tt> </tt>
<a name="L391"></a><tt class="py-lineno">391</tt>  <tt class="py-line">                                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L392"></a><tt class="py-lineno">392</tt>  <tt class="py-line">                                        <tt class="py-name">negation_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">negation_cues</tt><tt class="py-op">]</tt> </tt>
<a name="L393"></a><tt class="py-lineno">393</tt>  <tt class="py-line">                                         </tt>
<a name="L394"></a><tt class="py-lineno">394</tt>  <tt class="py-line">                                <tt class="py-comment"># Cargo el valor de las marcas de scope</tt> </tt>
<a name="L395"></a><tt class="py-lineno">395</tt>  <tt class="py-line">                                <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L396"></a><tt class="py-lineno">396</tt>  <tt class="py-line">                                <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L397"></a><tt class="py-lineno">397</tt>  <tt class="py-line">                                <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">hedge_scopes</tt><tt class="py-op">:</tt> </tt>
<a name="L398"></a><tt class="py-lineno">398</tt>  <tt class="py-line">                                        <tt class="py-keyword">if</tt> <tt class="py-name">i</tt><tt class="py-op">==</tt><tt class="py-string">'B'</tt><tt class="py-op">:</tt> </tt>
<a name="L399"></a><tt class="py-lineno">399</tt>  <tt class="py-line">                                                <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'B-SPECXCOPE'</tt><tt class="py-op">)</tt> </tt>
<a name="L400"></a><tt class="py-lineno">400</tt>  <tt class="py-line">                                                <tt class="py-name">hedge_scopes</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'I'</tt> </tt>
<a name="L401"></a><tt class="py-lineno">401</tt>  <tt class="py-line">                                        <tt class="py-keyword">elif</tt> <tt class="py-name">i</tt><tt class="py-op">==</tt><tt class="py-string">'I'</tt><tt class="py-op">:</tt> </tt>
<a name="L402"></a><tt class="py-lineno">402</tt>  <tt class="py-line">                                                <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'I-SPECXCOPE'</tt><tt class="py-op">)</tt>                                          </tt>
<a name="L403"></a><tt class="py-lineno">403</tt>  <tt class="py-line">                                        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L404"></a><tt class="py-lineno">404</tt>  <tt class="py-line">                                                <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'O'</tt><tt class="py-op">)</tt>    </tt>
<a name="L405"></a><tt class="py-lineno">405</tt>  <tt class="py-line">                                        <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-name">j</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> </tt>
<a name="L406"></a><tt class="py-lineno">406</tt>  <tt class="py-line"> </tt>
<a name="L407"></a><tt class="py-lineno">407</tt>  <tt class="py-line"> </tt>
<a name="L408"></a><tt class="py-lineno">408</tt>  <tt class="py-line">                                <tt class="py-comment"># Cargo el valor de las marcas de negation</tt> </tt>
<a name="L409"></a><tt class="py-lineno">409</tt>  <tt class="py-line">                                <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L410"></a><tt class="py-lineno">410</tt>  <tt class="py-line">                                <tt class="py-name">negation_scope_marks</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L411"></a><tt class="py-lineno">411</tt>  <tt class="py-line">                                <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">negation_scopes</tt><tt class="py-op">:</tt> </tt>
<a name="L412"></a><tt class="py-lineno">412</tt>  <tt class="py-line">                                        <tt class="py-keyword">if</tt> <tt class="py-name">i</tt><tt class="py-op">==</tt><tt class="py-string">'B'</tt><tt class="py-op">:</tt> </tt>
<a name="L413"></a><tt class="py-lineno">413</tt>  <tt class="py-line">                                                <tt class="py-name">negation_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'B-NEGXCOPE'</tt><tt class="py-op">)</tt> </tt>
<a name="L414"></a><tt class="py-lineno">414</tt>  <tt class="py-line">                                                <tt class="py-name">negation_scopes</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'I'</tt> </tt>
<a name="L415"></a><tt class="py-lineno">415</tt>  <tt class="py-line">                                        <tt class="py-keyword">elif</tt> <tt class="py-name">i</tt><tt class="py-op">==</tt><tt class="py-string">'I'</tt><tt class="py-op">:</tt> </tt>
<a name="L416"></a><tt class="py-lineno">416</tt>  <tt class="py-line">                                                <tt class="py-name">negation_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'I-NEGXCOPE'</tt><tt class="py-op">)</tt>                                                </tt>
<a name="L417"></a><tt class="py-lineno">417</tt>  <tt class="py-line">                                        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L418"></a><tt class="py-lineno">418</tt>  <tt class="py-line">                                                <tt class="py-name">negation_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'O'</tt><tt class="py-op">)</tt>         </tt>
<a name="L419"></a><tt class="py-lineno">419</tt>  <tt class="py-line">                                        <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-name">j</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> </tt>
<a name="L420"></a><tt class="py-lineno">420</tt>  <tt class="py-line">                                         </tt>
<a name="L421"></a><tt class="py-lineno">421</tt>  <tt class="py-line">                         </tt>
<a name="L422"></a><tt class="py-lineno">422</tt>  <tt class="py-line">                                <tt class="py-comment"># Si no hay ning&#250;n scope, siempre pongo 'O'</tt> </tt>
<a name="L423"></a><tt class="py-lineno">423</tt>  <tt class="py-line">                                <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">:</tt> </tt>
<a name="L424"></a><tt class="py-lineno">424</tt>  <tt class="py-line">                                        <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt><tt class="py-op">]</tt> </tt>
<a name="L425"></a><tt class="py-lineno">425</tt>  <tt class="py-line"> </tt>
<a name="L426"></a><tt class="py-lineno">426</tt>  <tt class="py-line">                                <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">negation_scope_marks</tt><tt class="py-op">:</tt> </tt>
<a name="L427"></a><tt class="py-lineno">427</tt>  <tt class="py-line">                                        <tt class="py-name">negation_scope_marks</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt><tt class="py-op">]</tt> </tt>
<a name="L428"></a><tt class="py-lineno">428</tt>  <tt class="py-line"> </tt>
<a name="L429"></a><tt class="py-lineno">429</tt>  <tt class="py-line">                                <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">hedge_cues</tt><tt class="py-op">:</tt> </tt>
<a name="L430"></a><tt class="py-lineno">430</tt>  <tt class="py-line">                                        <tt class="py-name">hedge_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt><tt class="py-op">]</tt> </tt>
<a name="L431"></a><tt class="py-lineno">431</tt>  <tt class="py-line">                                 </tt>
<a name="L432"></a><tt class="py-lineno">432</tt>  <tt class="py-line">                                <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">negation_cues</tt><tt class="py-op">:</tt> </tt>
<a name="L433"></a><tt class="py-lineno">433</tt>  <tt class="py-line">                                        <tt class="py-name">negation_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt><tt class="py-op">]</tt> </tt>
<a name="L434"></a><tt class="py-lineno">434</tt>  <tt class="py-line">                                         </tt>
<a name="L435"></a><tt class="py-lineno">435</tt>  <tt class="py-line">                                         </tt>
<a name="L436"></a><tt class="py-lineno">436</tt>  <tt class="py-line">                                <tt class="py-comment">#print &gt;&gt; stderr, 'Anoto el texto ',elem, ' con el tag ',hedge_cues</tt> </tt>
<a name="L437"></a><tt class="py-lineno">437</tt>  <tt class="py-line">                                <tt class="py-name">element_tagged_text</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">elem</tt><tt class="py-op">,</tt><tt class="py-op">{</tt><tt class="py-string">'SpecCue'</tt><tt class="py-op">:</tt><tt class="py-op">[</tt><tt class="py-name">h</tt> <tt class="py-keyword">for</tt> <tt class="py-name">h</tt> <tt class="py-keyword">in</tt> <tt class="py-name">hedge_cues</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-string">'NegCue'</tt><tt class="py-op">:</tt><tt class="py-op">[</tt><tt class="py-name">h</tt> <tt class="py-keyword">for</tt> <tt class="py-name">h</tt> <tt class="py-keyword">in</tt> <tt class="py-name">negation_cues</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-string">'specXcope'</tt><tt class="py-op">:</tt><tt class="py-name">hedge_scope_marks</tt><tt class="py-op">,</tt><tt class="py-string">'negXcope'</tt><tt class="py-op">:</tt><tt class="py-name">negation_scope_marks</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L438"></a><tt class="py-lineno">438</tt>  <tt class="py-line">                                         </tt>
<a name="L439"></a><tt class="py-lineno">439</tt>  <tt class="py-line">                                                         </tt>
<a name="L440"></a><tt class="py-lineno">440</tt>  <tt class="py-line">                        <tt class="py-comment">#print &gt;&gt; stderr, 'Texto taggeado:',element_tagged_text</tt> </tt>
<a name="L441"></a><tt class="py-lineno">441</tt>  <tt class="py-line">                         </tt>
<a name="L442"></a><tt class="py-lineno">442</tt>  <tt class="py-line">                        <tt class="py-comment"># Proceso los hijos</tt> </tt>
<a name="L443"></a><tt class="py-lineno">443</tt>  <tt class="py-line">                        <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L444"></a><tt class="py-lineno">444</tt>  <tt class="py-line">                        <tt class="py-keyword">for</tt> <tt class="py-name">ch</tt> <tt class="py-keyword">in</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">getchildren</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L445"></a><tt class="py-lineno">445</tt>  <tt class="py-line">                                <tt class="py-name">element_tagged_text</tt> <tt class="py-op">+=</tt> <tt class="py-name">get_bioscope_element_spec_tags</tt><tt class="py-op">(</tt><tt class="py-name">ch</tt><tt class="py-op">,</tt><tt class="py-name">hedge_cue_num</tt><tt class="py-op">,</tt><tt class="py-name">negation_cue_num</tt><tt class="py-op">,</tt><tt class="py-name">hedge_scopes</tt><tt class="py-op">,</tt><tt class="py-name">negation_scopes</tt><tt class="py-op">)</tt> </tt>
<a name="L446"></a><tt class="py-lineno">446</tt>  <tt class="py-line">                         </tt>
<a name="L447"></a><tt class="py-lineno">447</tt>  <tt class="py-line">                        <tt class="py-comment">#Proceso lo que hay a la derecha del tag</tt> </tt>
<a name="L448"></a><tt class="py-lineno">448</tt>  <tt class="py-line">                         </tt>
<a name="L449"></a><tt class="py-lineno">449</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">tail</tt><tt class="py-op">:</tt> </tt>
<a name="L450"></a><tt class="py-lineno">450</tt>  <tt class="py-line">                                <tt class="py-name">element_tail</tt><tt class="py-op">=</tt><tt class="py-name">wt</tt><tt class="py-op">.</tt><tt class="py-name">tokenize</tt><tt class="py-op">(</tt><tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">tail</tt><tt class="py-op">)</tt> </tt>
<a name="L451"></a><tt class="py-lineno">451</tt>  <tt class="py-line">                        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L452"></a><tt class="py-lineno">452</tt>  <tt class="py-line">                                <tt class="py-name">element_tail</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L453"></a><tt class="py-lineno">453</tt>  <tt class="py-line"> </tt>
<a name="L454"></a><tt class="py-lineno">454</tt>  <tt class="py-line">                        <tt class="py-name">element_tagged_tail</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L455"></a><tt class="py-lineno">455</tt>  <tt class="py-line">                         </tt>
<a name="L456"></a><tt class="py-lineno">456</tt>  <tt class="py-line">                         </tt>
<a name="L457"></a><tt class="py-lineno">457</tt>  <tt class="py-line">                        <tt class="py-comment"># Lo que est&#225; a la derecha del bloque nunca es marca de especulaci&#243;n ni de negaci&#243;n</tt> </tt>
<a name="L458"></a><tt class="py-lineno">458</tt>  <tt class="py-line">                        <tt class="py-name">hedge_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">hedge_cues</tt><tt class="py-op">]</tt> </tt>
<a name="L459"></a><tt class="py-lineno">459</tt>  <tt class="py-line">                        <tt class="py-name">negation_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt> <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">negation_cues</tt><tt class="py-op">]</tt> </tt>
<a name="L460"></a><tt class="py-lineno">460</tt>  <tt class="py-line">                         </tt>
<a name="L461"></a><tt class="py-lineno">461</tt>  <tt class="py-line">                        <tt class="py-comment"># Si termin&#243; el scope de especulaci&#243;n, borro el &#250;ltimo nivel de anidamiento</tt> </tt>
<a name="L462"></a><tt class="py-lineno">462</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">includes_hedging_or_negation</tt><tt class="py-op">(</tt><tt class="py-name">element</tt><tt class="py-op">,</tt><tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'id'</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">=</tt><tt class="py-string">'speculation'</tt><tt class="py-op">)</tt> <tt class="py-keyword">and</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt id="link-13" class="py-name"><a title="pln_inco.genia_tagger.tag" class="py-name" href="#" onclick="return doclink('link-13', 'tag', 'link-4');">tag</a></tt><tt class="py-op">==</tt><tt class="py-string">'xcope'</tt><tt class="py-op">:</tt> </tt>
<a name="L463"></a><tt class="py-lineno">463</tt>  <tt class="py-line">                                <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L464"></a><tt class="py-lineno">464</tt>  <tt class="py-line">                                <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">hedge_scopes</tt><tt class="py-op">:</tt> </tt>
<a name="L465"></a><tt class="py-lineno">465</tt>  <tt class="py-line">                                        <tt class="py-keyword">if</tt> <tt class="py-name">i</tt> <tt class="py-op">!=</tt><tt class="py-string">'O'</tt><tt class="py-op">:</tt> </tt>
<a name="L466"></a><tt class="py-lineno">466</tt>  <tt class="py-line">                                                <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-name">j</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> </tt>
<a name="L467"></a><tt class="py-lineno">467</tt>  <tt class="py-line">                                        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L468"></a><tt class="py-lineno">468</tt>  <tt class="py-line">                                                <tt class="py-name">hedge_scopes</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'O'</tt> </tt>
<a name="L469"></a><tt class="py-lineno">469</tt>  <tt class="py-line">                                                <tt class="py-keyword">break</tt> </tt>
<a name="L470"></a><tt class="py-lineno">470</tt>  <tt class="py-line">                                <tt class="py-comment">#Si llego al final, tengo que poner True el primero, porque hab&#237;a uno solo</tt> </tt>
<a name="L471"></a><tt class="py-lineno">471</tt>  <tt class="py-line">                                <tt class="py-name">hedge_scopes</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'O'</tt> </tt>
<a name="L472"></a><tt class="py-lineno">472</tt>  <tt class="py-line">                                                 </tt>
<a name="L473"></a><tt class="py-lineno">473</tt>  <tt class="py-line">                        <tt class="py-comment"># Si termin&#243; el scope de especulaci&#243;n, borro el &#250;ltimo nivel de anidamiento</tt> </tt>
<a name="L474"></a><tt class="py-lineno">474</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">includes_hedging_or_negation</tt><tt class="py-op">(</tt><tt class="py-name">element</tt><tt class="py-op">,</tt><tt class="py-name">element</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'id'</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">scope_type</tt><tt class="py-op">=</tt><tt class="py-string">'negation'</tt><tt class="py-op">)</tt> <tt class="py-keyword">and</tt> <tt class="py-name">element</tt><tt class="py-op">.</tt><tt id="link-14" class="py-name"><a title="pln_inco.genia_tagger.tag" class="py-name" href="#" onclick="return doclink('link-14', 'tag', 'link-4');">tag</a></tt><tt class="py-op">==</tt><tt class="py-string">'xcope'</tt><tt class="py-op">:</tt> </tt>
<a name="L475"></a><tt class="py-lineno">475</tt>  <tt class="py-line">                                <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L476"></a><tt class="py-lineno">476</tt>  <tt class="py-line">                                <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">negation_scopes</tt><tt class="py-op">:</tt> </tt>
<a name="L477"></a><tt class="py-lineno">477</tt>  <tt class="py-line">                                        <tt class="py-keyword">if</tt> <tt class="py-name">i</tt> <tt class="py-op">!=</tt><tt class="py-string">'O'</tt><tt class="py-op">:</tt> </tt>
<a name="L478"></a><tt class="py-lineno">478</tt>  <tt class="py-line">                                                <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-name">j</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> </tt>
<a name="L479"></a><tt class="py-lineno">479</tt>  <tt class="py-line">                                        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L480"></a><tt class="py-lineno">480</tt>  <tt class="py-line">                                                <tt class="py-name">negation_scopes</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'O'</tt> </tt>
<a name="L481"></a><tt class="py-lineno">481</tt>  <tt class="py-line">                                                <tt class="py-keyword">break</tt> </tt>
<a name="L482"></a><tt class="py-lineno">482</tt>  <tt class="py-line">                                <tt class="py-comment">#Si llego al final, tengo que poner True el primero, porque hab&#237;a uno solo</tt> </tt>
<a name="L483"></a><tt class="py-lineno">483</tt>  <tt class="py-line">                                <tt class="py-name">negation_scopes</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'O'</tt> </tt>
<a name="L484"></a><tt class="py-lineno">484</tt>  <tt class="py-line">                                                 </tt>
<a name="L485"></a><tt class="py-lineno">485</tt>  <tt class="py-line">                                                 </tt>
<a name="L486"></a><tt class="py-lineno">486</tt>  <tt class="py-line"> </tt>
<a name="L487"></a><tt class="py-lineno">487</tt>  <tt class="py-line">                        <tt class="py-comment"># Cargo el valor de las marcas de scope</tt> </tt>
<a name="L488"></a><tt class="py-lineno">488</tt>  <tt class="py-line">                        <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L489"></a><tt class="py-lineno">489</tt>  <tt class="py-line">                        <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L490"></a><tt class="py-lineno">490</tt>  <tt class="py-line">                        <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">hedge_scopes</tt><tt class="py-op">:</tt> </tt>
<a name="L491"></a><tt class="py-lineno">491</tt>  <tt class="py-line">                                <tt class="py-keyword">if</tt> <tt class="py-name">i</tt><tt class="py-op">==</tt><tt class="py-string">'B'</tt><tt class="py-op">:</tt> </tt>
<a name="L492"></a><tt class="py-lineno">492</tt>  <tt class="py-line">                                        <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'B-SPECXCOPE'</tt><tt class="py-op">)</tt> </tt>
<a name="L493"></a><tt class="py-lineno">493</tt>  <tt class="py-line">                                        <tt class="py-name">hedge_scopes</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'I'</tt> </tt>
<a name="L494"></a><tt class="py-lineno">494</tt>  <tt class="py-line">                                <tt class="py-keyword">elif</tt> <tt class="py-name">i</tt><tt class="py-op">==</tt><tt class="py-string">'I'</tt><tt class="py-op">:</tt> </tt>
<a name="L495"></a><tt class="py-lineno">495</tt>  <tt class="py-line">                                        <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'I-SPECXCOPE'</tt><tt class="py-op">)</tt>                                          </tt>
<a name="L496"></a><tt class="py-lineno">496</tt>  <tt class="py-line">                                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L497"></a><tt class="py-lineno">497</tt>  <tt class="py-line">                                        <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'O'</tt><tt class="py-op">)</tt>    </tt>
<a name="L498"></a><tt class="py-lineno">498</tt>  <tt class="py-line">                                <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-name">j</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> </tt>
<a name="L499"></a><tt class="py-lineno">499</tt>  <tt class="py-line"> </tt>
<a name="L500"></a><tt class="py-lineno">500</tt>  <tt class="py-line">                        <tt class="py-comment"># Cargo el valor de las marcas de negation</tt> </tt>
<a name="L501"></a><tt class="py-lineno">501</tt>  <tt class="py-line">                        <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L502"></a><tt class="py-lineno">502</tt>  <tt class="py-line">                        <tt class="py-name">negation_scope_marks</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L503"></a><tt class="py-lineno">503</tt>  <tt class="py-line">                        <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">negation_scopes</tt><tt class="py-op">:</tt> </tt>
<a name="L504"></a><tt class="py-lineno">504</tt>  <tt class="py-line">                                <tt class="py-keyword">if</tt> <tt class="py-name">i</tt><tt class="py-op">==</tt><tt class="py-string">'B'</tt><tt class="py-op">:</tt> </tt>
<a name="L505"></a><tt class="py-lineno">505</tt>  <tt class="py-line">                                        <tt class="py-name">negation_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'B-NEGXCOPE'</tt><tt class="py-op">)</tt> </tt>
<a name="L506"></a><tt class="py-lineno">506</tt>  <tt class="py-line">                                        <tt class="py-name">negation_scopes</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-string">'I'</tt> </tt>
<a name="L507"></a><tt class="py-lineno">507</tt>  <tt class="py-line">                                <tt class="py-keyword">elif</tt> <tt class="py-name">i</tt><tt class="py-op">==</tt><tt class="py-string">'I'</tt><tt class="py-op">:</tt> </tt>
<a name="L508"></a><tt class="py-lineno">508</tt>  <tt class="py-line">                                        <tt class="py-name">negation_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'I-NEGXCOPE'</tt><tt class="py-op">)</tt>                                                </tt>
<a name="L509"></a><tt class="py-lineno">509</tt>  <tt class="py-line">                                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L510"></a><tt class="py-lineno">510</tt>  <tt class="py-line">                                        <tt class="py-name">negation_scope_marks</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">'O'</tt><tt class="py-op">)</tt>         </tt>
<a name="L511"></a><tt class="py-lineno">511</tt>  <tt class="py-line">                                <tt class="py-name">j</tt><tt class="py-op">=</tt><tt class="py-name">j</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> </tt>
<a name="L512"></a><tt class="py-lineno">512</tt>  <tt class="py-line"> </tt>
<a name="L513"></a><tt class="py-lineno">513</tt>  <tt class="py-line"> </tt>
<a name="L514"></a><tt class="py-lineno">514</tt>  <tt class="py-line">                                         </tt>
<a name="L515"></a><tt class="py-lineno">515</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">:</tt> </tt>
<a name="L516"></a><tt class="py-lineno">516</tt>  <tt class="py-line">                                <tt class="py-name">hedge_scope_marks</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt><tt class="py-op">]</tt> </tt>
<a name="L517"></a><tt class="py-lineno">517</tt>  <tt class="py-line"> </tt>
<a name="L518"></a><tt class="py-lineno">518</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">negation_scope_marks</tt><tt class="py-op">:</tt> </tt>
<a name="L519"></a><tt class="py-lineno">519</tt>  <tt class="py-line">                                <tt class="py-name">negation_scope_marks</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt><tt class="py-op">]</tt> </tt>
<a name="L520"></a><tt class="py-lineno">520</tt>  <tt class="py-line">                                 </tt>
<a name="L521"></a><tt class="py-lineno">521</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">hedge_cues</tt><tt class="py-op">:</tt> </tt>
<a name="L522"></a><tt class="py-lineno">522</tt>  <tt class="py-line">                                <tt class="py-name">hedge_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt><tt class="py-op">]</tt> </tt>
<a name="L523"></a><tt class="py-lineno">523</tt>  <tt class="py-line">                                 </tt>
<a name="L524"></a><tt class="py-lineno">524</tt>  <tt class="py-line">                                                         </tt>
<a name="L525"></a><tt class="py-lineno">525</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">negation_cues</tt><tt class="py-op">:</tt> </tt>
<a name="L526"></a><tt class="py-lineno">526</tt>  <tt class="py-line">                                <tt class="py-name">negation_cues</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">'O'</tt><tt class="py-op">]</tt> </tt>
<a name="L527"></a><tt class="py-lineno">527</tt>  <tt class="py-line">                         </tt>
<a name="L528"></a><tt class="py-lineno">528</tt>  <tt class="py-line">                         </tt>
<a name="L529"></a><tt class="py-lineno">529</tt>  <tt class="py-line">                        <tt class="py-keyword">for</tt> <tt class="py-name">elem</tt> <tt class="py-keyword">in</tt> <tt class="py-name">element_tail</tt><tt class="py-op">:</tt> </tt>
<a name="L530"></a><tt class="py-lineno">530</tt>  <tt class="py-line">                                <tt class="py-comment">#print &gt;&gt; stderr, 'Anoto el texto ',elem, ' con el tag ',hedge_cues</tt> </tt>
<a name="L531"></a><tt class="py-lineno">531</tt>  <tt class="py-line">                                <tt class="py-name">element_tagged_tail</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">elem</tt><tt class="py-op">,</tt><tt class="py-op">{</tt><tt class="py-string">'SpecCue'</tt><tt class="py-op">:</tt><tt class="py-op">[</tt><tt class="py-name">h</tt> <tt class="py-keyword">for</tt> <tt class="py-name">h</tt> <tt class="py-keyword">in</tt> <tt class="py-name">hedge_cues</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-string">'NegCue'</tt><tt class="py-op">:</tt><tt class="py-op">[</tt><tt class="py-name">h</tt> <tt class="py-keyword">for</tt> <tt class="py-name">h</tt> <tt class="py-keyword">in</tt> <tt class="py-name">negation_cues</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-string">'specXcope'</tt><tt class="py-op">:</tt><tt class="py-name">hedge_scope_marks</tt><tt class="py-op">,</tt><tt class="py-string">'negXcope'</tt><tt class="py-op">:</tt><tt class="py-name">negation_scope_marks</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L532"></a><tt class="py-lineno">532</tt>  <tt class="py-line"> </tt>
<a name="L533"></a><tt class="py-lineno">533</tt>  <tt class="py-line"> </tt>
<a name="L534"></a><tt class="py-lineno">534</tt>  <tt class="py-line"> </tt>
<a name="L535"></a><tt class="py-lineno">535</tt>  <tt class="py-line">                        <tt class="py-comment">#print &gt;&gt; stderr'Texto taggeado:',element_tagged_tail</tt> </tt>
<a name="L536"></a><tt class="py-lineno">536</tt>  <tt class="py-line">                        <tt class="py-comment">#print &gt;&gt; stderr,  'Retorno ',element_tagged_text + element_tagged_tail</tt> </tt>
<a name="L537"></a><tt class="py-lineno">537</tt>  <tt class="py-line">                        <tt class="py-keyword">return</tt> <tt class="py-name">element_tagged_text</tt> <tt class="py-op">+</tt> <tt class="py-name">element_tagged_tail</tt> </tt>
</div><a name="L538"></a><tt class="py-lineno">538</tt>  <tt class="py-line">                         </tt>
<a name="L539"></a><tt class="py-lineno">539</tt>  <tt class="py-line">                 </tt>
<a name="L540"></a><tt class="py-lineno">540</tt>  <tt class="py-line">                <tt class="py-comment"># Abro el archivo .bioscope correspondiente al documento</tt> </tt>
<a name="L541"></a><tt class="py-lineno">541</tt>  <tt class="py-line">                <tt class="py-name">bioscope_doc</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bioscope_files_corpus</tt><tt class="py-op">.</tt><tt class="py-name">xml</tt><tt class="py-op">(</tt><tt class="py-name">docId</tt><tt class="py-op">+</tt><tt class="py-string">'.bioscope'</tt><tt class="py-op">)</tt> </tt>
<a name="L542"></a><tt class="py-lineno">542</tt>  <tt class="py-line">                <tt class="py-keyword">for</tt> <tt class="py-name">sentence</tt> <tt class="py-keyword">in</tt> <tt class="py-name">bioscope_doc</tt><tt class="py-op">.</tt><tt class="py-name">getchildren</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L543"></a><tt class="py-lineno">543</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">sentence</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'id'</tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-name">sentenceId</tt><tt class="py-op">:</tt> </tt>
<a name="L544"></a><tt class="py-lineno">544</tt>  <tt class="py-line">                                <tt class="py-comment"># Proceso la oraci&#243;n y obtengo los tags de especulaci&#243;n</tt> </tt>
<a name="L545"></a><tt class="py-lineno">545</tt>  <tt class="py-line">                                <tt class="py-name">tokens</tt><tt class="py-op">=</tt><tt class="py-name">get_bioscope_element_spec_tags</tt><tt class="py-op">(</tt><tt class="py-name">sentence</tt><tt class="py-op">,</tt><tt class="py-name">hedge_cue_num</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-name">negation_cue_num</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-name">hedge_scopes</tt><tt class="py-op">=</tt><tt class="py-name">hedge_scopes</tt><tt class="py-op">,</tt> <tt class="py-name">negation_scopes</tt><tt class="py-op">=</tt><tt class="py-name">negation_scopes</tt><tt class="py-op">)</tt> </tt>
<a name="L546"></a><tt class="py-lineno">546</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">tokens</tt> </tt>
</div></div><a name="L547"></a><tt class="py-lineno">547</tt>  <tt class="py-line">                                 </tt>
<a name="L548"></a><tt class="py-lineno">548</tt>  <tt class="py-line">                 </tt>
<a name="L549"></a><tt class="py-lineno">549</tt>  <tt class="py-line"> </tt>
<a name="L550"></a><tt class="py-lineno">550</tt>  <tt class="py-line"> </tt>
<a name="L551"></a><tt class="py-lineno">551</tt>  <tt class="py-line"> </tt>
<a name="bioscope_get_text"></a><div id="bioscope_get_text-def"><a name="L552"></a><tt class="py-lineno">552</tt> <a class="py-toggle" href="#" id="bioscope_get_text-toggle" onclick="return toggle('bioscope_get_text');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="pln_inco.bioscope.util-module.html#bioscope_get_text">bioscope_get_text</a><tt class="py-op">(</tt><tt class="py-param">xml_element</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="bioscope_get_text-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="bioscope_get_text-expanded"><a name="L553"></a><tt class="py-lineno">553</tt>  <tt class="py-line">        <tt class="py-docstring">""" </tt> </tt>
<a name="L554"></a><tt class="py-lineno">554</tt>  <tt class="py-line"><tt class="py-docstring">        Funci&#243;n auxiliar que obtiene el texto abarcado por un elemento xml del corpus bioscope sin las marcas intermedias </tt> </tt>
<a name="L555"></a><tt class="py-lineno">555</tt>  <tt class="py-line"><tt class="py-docstring">        @arg xml_element: XML del corpus Bioscope</tt> </tt>
<a name="L556"></a><tt class="py-lineno">556</tt>  <tt class="py-line"><tt class="py-docstring">        @type xml_element: C{xml.etree.ElementTree}</tt> </tt>
<a name="L557"></a><tt class="py-lineno">557</tt>  <tt class="py-line"><tt class="py-docstring">        @rtype: C{String}</tt> </tt>
<a name="L558"></a><tt class="py-lineno">558</tt>  <tt class="py-line"><tt class="py-docstring">        """</tt> </tt>
<a name="L559"></a><tt class="py-lineno">559</tt>  <tt class="py-line"> </tt>
<a name="L560"></a><tt class="py-lineno">560</tt>  <tt class="py-line">        <tt class="py-comment"># Si es una oraci&#243;n, hago trampa y no le pongo el tail para evitar los tabuladores del final que no s&#233; para</tt> </tt>
<a name="L561"></a><tt class="py-lineno">561</tt>  <tt class="py-line">        <tt class="py-comment"># qu&#233; los tiene</tt> </tt>
<a name="L562"></a><tt class="py-lineno">562</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">xml_element</tt><tt class="py-op">.</tt><tt class="py-name">text</tt><tt class="py-op">:</tt>  </tt>
<a name="L563"></a><tt class="py-lineno">563</tt>  <tt class="py-line">                <tt class="py-name">texto</tt><tt class="py-op">=</tt><tt class="py-name">xml_element</tt><tt class="py-op">.</tt><tt class="py-name">text</tt> </tt>
<a name="L564"></a><tt class="py-lineno">564</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L565"></a><tt class="py-lineno">565</tt>  <tt class="py-line">                <tt class="py-name">texto</tt><tt class="py-op">=</tt><tt class="py-string">''</tt> </tt>
<a name="L566"></a><tt class="py-lineno">566</tt>  <tt class="py-line"> </tt>
<a name="L567"></a><tt class="py-lineno">567</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">xml_element</tt><tt class="py-op">.</tt><tt class="py-name">tail</tt> <tt class="py-keyword">and</tt> <tt class="py-name">xml_element</tt><tt class="py-op">.</tt><tt id="link-15" class="py-name"><a title="pln_inco.genia_tagger.tag" class="py-name" href="#" onclick="return doclink('link-15', 'tag', 'link-4');">tag</a></tt> <tt class="py-op">!=</tt> <tt class="py-string">'sentence'</tt><tt class="py-op">:</tt> </tt>
<a name="L568"></a><tt class="py-lineno">568</tt>  <tt class="py-line">                <tt class="py-name">tail</tt><tt class="py-op">=</tt><tt class="py-name">xml_element</tt><tt class="py-op">.</tt><tt class="py-name">tail</tt> </tt>
<a name="L569"></a><tt class="py-lineno">569</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L570"></a><tt class="py-lineno">570</tt>  <tt class="py-line">                <tt class="py-name">tail</tt><tt class="py-op">=</tt><tt class="py-string">''</tt> </tt>
<a name="L571"></a><tt class="py-lineno">571</tt>  <tt class="py-line"> </tt>
<a name="L572"></a><tt class="py-lineno">572</tt>  <tt class="py-line">        <tt class="py-name">texto_hijos</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt id="link-16" class="py-name" targets="Function pln_inco.bioscope.util.bioscope_get_text()=pln_inco.bioscope.util-module.html#bioscope_get_text"><a title="pln_inco.bioscope.util.bioscope_get_text" class="py-name" href="#" onclick="return doclink('link-16', 'bioscope_get_text', 'link-16');">bioscope_get_text</a></tt><tt class="py-op">(</tt><tt class="py-name">ch</tt><tt class="py-op">)</tt> <tt class="py-keyword">for</tt> <tt class="py-name">ch</tt> <tt class="py-keyword">in</tt> <tt class="py-name">xml_element</tt><tt class="py-op">.</tt><tt class="py-name">getchildren</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L573"></a><tt class="py-lineno">573</tt>  <tt class="py-line">        <tt class="py-name">res</tt><tt class="py-op">=</tt><tt class="py-string">''</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-name">texto</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">texto_hijos</tt><tt class="py-op">+</tt><tt class="py-op">[</tt><tt class="py-name">tail</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L574"></a><tt class="py-lineno">574</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">res</tt> </tt>
</div><a name="L575"></a><tt class="py-lineno">575</tt>  <tt class="py-line">                                 </tt>
<a name="L576"></a><tt class="py-lineno">576</tt>  <tt class="py-line"> </tt>
<a name="bioscope_retokenize"></a><div id="bioscope_retokenize-def"><a name="L577"></a><tt class="py-lineno">577</tt> <a class="py-toggle" href="#" id="bioscope_retokenize-toggle" onclick="return toggle('bioscope_retokenize');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="pln_inco.bioscope.util-module.html#bioscope_retokenize">bioscope_retokenize</a><tt class="py-op">(</tt><tt class="py-param">genia_words</tt><tt class="py-op">,</tt><tt class="py-param">bioscope_tokens</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="bioscope_retokenize-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="bioscope_retokenize-expanded"><a name="L578"></a><tt class="py-lineno">578</tt>  <tt class="py-line">        <tt class="py-docstring">"""</tt> </tt>
<a name="L579"></a><tt class="py-lineno">579</tt>  <tt class="py-line"><tt class="py-docstring">        Dada una lista de palabras resultado de la tokenizaci&#243;n por el tagger de genia y otra lista resultado de la tokenizaci&#243;n</tt> </tt>
<a name="L580"></a><tt class="py-lineno">580</tt>  <tt class="py-line"><tt class="py-docstring">        del texto utilizando C{nltk.tokenize.TreebankWordTokenizer()}, retokeniza al segundo para que quede igual al de Genia. </tt> </tt>
<a name="L581"></a><tt class="py-lineno">581</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L582"></a><tt class="py-lineno">582</tt>  <tt class="py-line"><tt class="py-docstring">        @arg genia_words: lista de palabras, resultado del an&#225;lisis con el Genia Tagger</tt> </tt>
<a name="L583"></a><tt class="py-lineno">583</tt>  <tt class="py-line"><tt class="py-docstring">        @type genia_words: C{List}</tt> </tt>
<a name="L584"></a><tt class="py-lineno">584</tt>  <tt class="py-line"><tt class="py-docstring">        @arg bioscope_tokens: lista de tokens resultado del an&#225;lisis con C{nltk.tokenize.TreebankWordTokenizer()}</tt> </tt>
<a name="L585"></a><tt class="py-lineno">585</tt>  <tt class="py-line"><tt class="py-docstring">        @type bioscope_tokens: C{List}</tt> </tt>
<a name="L586"></a><tt class="py-lineno">586</tt>  <tt class="py-line"><tt class="py-docstring">        @return: bioscope_tokens, retokenizado</tt> </tt>
<a name="L587"></a><tt class="py-lineno">587</tt>  <tt class="py-line"><tt class="py-docstring">        @rtype: C{List}</tt> </tt>
<a name="L588"></a><tt class="py-lineno">588</tt>  <tt class="py-line"><tt class="py-docstring">        """</tt> </tt>
<a name="L589"></a><tt class="py-lineno">589</tt>  <tt class="py-line">         </tt>
<a name="L590"></a><tt class="py-lineno">590</tt>  <tt class="py-line">        <tt class="py-comment">#print &gt;&gt; stderr, "Retokenizo ",[x[0] for x in genia_words]</tt> </tt>
<a name="L591"></a><tt class="py-lineno">591</tt>  <tt class="py-line">        <tt class="py-comment">#print &gt;&gt; stderr, "Bioscope tiene: ", [x[0] for x in bioscope_tokens]</tt> </tt>
<a name="L592"></a><tt class="py-lineno">592</tt>  <tt class="py-line"> </tt>
<a name="L593"></a><tt class="py-lineno">593</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">range</tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">genia_words</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L594"></a><tt class="py-lineno">594</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">i</tt><tt class="py-op">&lt;</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L595"></a><tt class="py-lineno">595</tt>  <tt class="py-line">                        <tt class="py-name">genia_word</tt><tt class="py-op">=</tt><tt class="py-name">genia_words</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L596"></a><tt class="py-lineno">596</tt>  <tt class="py-line">                        <tt class="py-name">treebank_token</tt><tt class="py-op">=</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L597"></a><tt class="py-lineno">597</tt>  <tt class="py-line">                        <tt class="py-comment">#print &gt;&gt; stderr,  genia_word,bioscope_word</tt> </tt>
<a name="L598"></a><tt class="py-lineno">598</tt>  <tt class="py-line"> </tt>
<a name="L599"></a><tt class="py-lineno">599</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">genia_word</tt> <tt class="py-op">!=</tt> <tt class="py-name">treebank_token</tt><tt class="py-op">:</tt> </tt>
<a name="L600"></a><tt class="py-lineno">600</tt>  <tt class="py-line">                                <tt class="py-comment"># Caso 0: par&#233;ntesis y eso que parecen diferentes pero no lo son</tt> </tt>
<a name="L601"></a><tt class="py-lineno">601</tt>  <tt class="py-line">                                <tt class="py-keyword">if</tt> <tt class="py-name">treebank_token</tt> <tt class="py-keyword">in</tt> <tt class="py-op">(</tt><tt class="py-string">'('</tt><tt class="py-op">,</tt><tt class="py-string">')'</tt><tt class="py-op">,</tt><tt class="py-string">'['</tt><tt class="py-op">,</tt><tt class="py-string">']'</tt><tt class="py-op">,</tt><tt class="py-string">'{'</tt><tt class="py-op">,</tt><tt class="py-string">'}'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L602"></a><tt class="py-lineno">602</tt>  <tt class="py-line">                                        <tt class="py-keyword">pass</tt> </tt>
<a name="L603"></a><tt class="py-lineno">603</tt>  <tt class="py-line">                                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L604"></a><tt class="py-lineno">604</tt>  <tt class="py-line">                                        <tt class="py-comment"># Caso 2: si la palabra de genia es igual a la de bioscope m&#225;s la siguiente, bioscope lo separ&#243;</tt> </tt>
<a name="L605"></a><tt class="py-lineno">605</tt>  <tt class="py-line">                                        <tt class="py-keyword">if</tt> <tt class="py-name">i</tt><tt class="py-op">&lt;</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">)</tt><tt class="py-op">-</tt><tt class="py-number">1</tt> <tt class="py-keyword">and</tt> <tt class="py-name">genia_word</tt><tt class="py-op">==</tt><tt class="py-name">treebank_token</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">:</tt> </tt>
<a name="L606"></a><tt class="py-lineno">606</tt>  <tt class="py-line">                                                <tt class="py-comment">#print&gt;&gt;stderr, "Aplico regla 2"</tt> </tt>
<a name="L607"></a><tt class="py-lineno">607</tt>  <tt class="py-line">                                                <tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt>  </tt>
<a name="L608"></a><tt class="py-lineno">608</tt>  <tt class="py-line">                                                <tt class="py-keyword">del</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L609"></a><tt class="py-lineno">609</tt>  <tt class="py-line">                                        <tt class="py-comment"># Caso 3: podr&#237;an ser tres palabras </tt> </tt>
<a name="L610"></a><tt class="py-lineno">610</tt>  <tt class="py-line">                                        <tt class="py-keyword">elif</tt> <tt class="py-name">i</tt><tt class="py-op">&lt;</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">)</tt><tt class="py-op">-</tt><tt class="py-number">2</tt> <tt class="py-keyword">and</tt>  <tt class="py-name">genia_word</tt><tt class="py-op">==</tt><tt class="py-name">treebank_token</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">:</tt> </tt>
<a name="L611"></a><tt class="py-lineno">611</tt>  <tt class="py-line">                                                <tt class="py-comment">#print&gt;&gt;stderr, "Aplico regla 3"</tt> </tt>
<a name="L612"></a><tt class="py-lineno">612</tt>  <tt class="py-line">                                                <tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt>                                        </tt>
<a name="L613"></a><tt class="py-lineno">613</tt>  <tt class="py-line">                                                <tt class="py-keyword">del</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L614"></a><tt class="py-lineno">614</tt>  <tt class="py-line">                                                <tt class="py-keyword">del</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L615"></a><tt class="py-lineno">615</tt>  <tt class="py-line">                                        <tt class="py-comment"># Caso 4: podr&#237;an ser cuatro palabras !</tt> </tt>
<a name="L616"></a><tt class="py-lineno">616</tt>  <tt class="py-line">                                        <tt class="py-keyword">elif</tt> <tt class="py-name">i</tt><tt class="py-op">&lt;</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">)</tt><tt class="py-op">-</tt><tt class="py-number">3</tt> <tt class="py-keyword">and</tt> <tt class="py-name">genia_word</tt><tt class="py-op">==</tt><tt class="py-name">treebank_token</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">3</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">:</tt> </tt>
<a name="L617"></a><tt class="py-lineno">617</tt>  <tt class="py-line">                                                <tt class="py-comment">#print&gt;&gt;stderr, "Aplico regla 4"</tt> </tt>
<a name="L618"></a><tt class="py-lineno">618</tt>  <tt class="py-line">                                                <tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">3</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt>                                        </tt>
<a name="L619"></a><tt class="py-lineno">619</tt>  <tt class="py-line">                                                <tt class="py-keyword">del</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L620"></a><tt class="py-lineno">620</tt>  <tt class="py-line">                                                <tt class="py-keyword">del</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L621"></a><tt class="py-lineno">621</tt>  <tt class="py-line">                                                <tt class="py-keyword">del</tt><tt class="py-op">(</tt><tt class="py-name">bioscope_tokens</tt><tt class="py-op">[</tt><tt class="py-name">i</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L622"></a><tt class="py-lineno">622</tt>  <tt class="py-line"> </tt>
<a name="L623"></a><tt class="py-lineno">623</tt>  <tt class="py-line"> </tt>
<a name="L624"></a><tt class="py-lineno">624</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">bioscope_tokens</tt> </tt>
</div><a name="L625"></a><tt class="py-lineno">625</tt>  <tt class="py-line"> </tt><script type="text/javascript">
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